G1402492



Basic Information


Item Value
gene id G1402492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66045024 ~ 66045400 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1601675
tgggaggagaaggagggagagagggaggagaaggaggcagagagggaggagaaggaggtagagagggaggagaaggaggcagagagggaggaaaacgaggcagagagggaggagaaggaggtagagactggggagaaggaggtagatagggaggagaaggaggtagatagggaggagaaggaggtagagagggaggaagaaagagatagagagggagcagaaggaggtagagagggaggagaaggagggagagagggaggagaaggaggtagagagggaggagaaggaggtagagagggaggagaaggaggtagagagggaggagaaggagggag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1601675 True 335 lncRNA 0.57 2 66045024 66045400

Neighbor


gene id symbol gene type direction distance location
LOC110492562 LOC106568106 coding downstream 304248 65715711 ~ 65754610 (-)
cttnbp2nlb cttnbp2nl coding downstream 340246 65660280 ~ 65704778 (-)
apeh apeh coding downstream 400883 65633130 ~ 65644141 (-)
tlr9 tlr9 coding downstream 416531 65623175 ~ 65628493 (-)
LOC110518541 LOC106566519 coding downstream 424732 65131650 ~ 65620292 (-)
ddx20 ddx20 coding upstream 224237 66269637 ~ 66276483 (-)
LOC110492566 LOC106566511 coding upstream 235556 66280956 ~ 66296439 (-)
b4galt3 b4galt3 coding upstream 258189 66303589 ~ 66308067 (-)
bgnb bgn coding upstream 275022 66320422 ~ 66345643 (-)
si:dkey-32e6.6 LOC106566508 coding upstream 336603 66382003 ~ 66421064 (-)
G1402485 NA non-coding downstream 9140 66035339 ~ 66035884 (-)
G1402442 NA non-coding downstream 75110 65969565 ~ 65969914 (-)
G1401717 NA non-coding downstream 111757 65932898 ~ 65933267 (-)
G1401702 NA non-coding downstream 141141 65903559 ~ 65903883 (-)
G1401692 NA non-coding downstream 161591 65883226 ~ 65883433 (-)
G1402550 NA non-coding upstream 103237 66148637 ~ 66148974 (-)
G1402585 NA non-coding upstream 155759 66201159 ~ 66201503 (-)
G1402588 NA non-coding upstream 160228 66205628 ~ 66206240 (-)
G1402604 NA non-coding upstream 188853 66234253 ~ 66317716 (-)
G1402620 NA non-coding upstream 254246 66299646 ~ 66301517 (-)
G1401617 NA other downstream 408652 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1596552 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1734568 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 1759031 64285628 ~ 64285993 (-)
G1402686 srpk3 other upstream 380151 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 439501 66484901 ~ 66494667 (-)
G1403498 NA other upstream 1398021 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2745789 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 3157886 69203286 ~ 69207158 (-)

Expression



Co-expression Network