Gene
RNA
| Item | Value |
|---|---|
| gene id | G1401843 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 66125068 ~ 66135243 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1600886 | False | 513 | lncRNA | 0.42 | 4 | 66125068 | 66135243 |
| TU1600887 | True | 298 | lncRNA | 0.38 | 3 | 66125068 | 66132156 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| capza1b | capza1 | coding | upstream | 471131 | 65648356 ~ 65653937 (+) |
| cacna2d3a | LOC102307471 | coding | upstream | 1088785 | 64722542 ~ 65037527 (+) |
| LOC110492553 | LOC106566530 | coding | upstream | 1451236 | 64670768 ~ 64673832 (+) |
| LOC100136613 | LOC106566534 | coding | upstream | 1479887 | 64630443 ~ 64645181 (+) |
| LOC110519666 | LOC108235233 | coding | upstream | 1502600 | 64517151 ~ 64622468 (+) |
| srpk3 | srpk3 | coding | downstream | 288646 | 66423889 ~ 66434911 (+) |
| comta | LOC106566505 | coding | downstream | 342034 | 66477277 ~ 66494685 (+) |
| grm6a | LOC106566502 | coding | downstream | 389493 | 66524736 ~ 66565764 (+) |
| usp11 | usp11 | coding | downstream | 434233 | 66569476 ~ 66582944 (+) |
| uxt | uxt | coding | downstream | 462394 | 66597637 ~ 66599559 (+) |
| G1401805 | NA | non-coding | upstream | 65876 | 66056809 ~ 66059192 (+) |
| G1401741 | NA | non-coding | upstream | 155220 | 65969559 ~ 65969848 (+) |
| G1401722 | NA | non-coding | upstream | 186032 | 65938821 ~ 65939036 (+) |
| G1401367 | NA | non-coding | upstream | 204782 | 65920062 ~ 65920286 (+) |
| G1401366 | NA | non-coding | upstream | 205355 | 65919503 ~ 65919713 (+) |
| G1401855 | NA | non-coding | downstream | 9490 | 66144733 ~ 66144938 (+) |
| G1401856 | NA | non-coding | downstream | 10581 | 66145824 ~ 66146122 (+) |
| G1401857 | NA | non-coding | downstream | 11196 | 66146439 ~ 66146854 (+) |
| G1401913 | NA | non-coding | downstream | 99010 | 66234253 ~ 66317709 (+) |
| LOC110492564 | LOC102303593 | non-coding | downstream | 128910 | 65996027 ~ 66267216 (+) |
| G1401782 | NA | other | upstream | 100823 | 66019001 ~ 66024245 (+) |
| G1401354 | NA | other | upstream | 228005 | 65895891 ~ 65897063 (+) |
| G1401074 | NA | other | upstream | 866224 | 65258515 ~ 65258844 (+) |
| G1401041 | NA | other | upstream | 934793 | 65189990 ~ 65190275 (+) |
| G1400202 | LOC106566541 | other | upstream | 1650780 | 64473548 ~ 64476421 (+) |
| G1402066 | NA | other | downstream | 408068 | 66543311 ~ 66543685 (+) |
| G1402256 | NA | other | downstream | 779122 | 66914365 ~ 66914716 (+) |
| LOC110492593 | LOC105017353 | other | downstream | 1336701 | 67459278 ~ 67476876 (+) |
| G1403412 | LOC106566473 | other | downstream | 1517825 | 67653068 ~ 67653447 (+) |
| G1403463 | NA | other | downstream | 1603719 | 67738962 ~ 67739702 (+) |
