G1402550



Basic Information


Item Value
gene id G1402550
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66148637 ~ 66148974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1601736
gctttccaccagacactgggagatgaattcaccttccaGTAGGACGACAACCTTacacactggagtttcttaccaagacaacattgaatgtccttgagtggcctagttacagttttgacttaaatcagcttgaaaatatatggcaaaacttgaaaatggctgtctagcaatgatcaacaaccaacttgacagagctttaagaatattgtacaatccaattgagcaaagctcttagagacccagaaagactcacagctgtattcgctgccaaaggtgattctaagatgtattgactctggggtgtgaatacttacgtaaattagatatttcctttgcta

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1601736 True 338 lncRNA 0.40 1 66148637 66148974

Neighbor


gene id symbol gene type direction distance location
LOC110492562 LOC106568106 coding downstream 407861 65715711 ~ 65754610 (-)
cttnbp2nlb cttnbp2nl coding downstream 443859 65660280 ~ 65704778 (-)
apeh apeh coding downstream 504496 65633130 ~ 65644141 (-)
tlr9 tlr9 coding downstream 520144 65623175 ~ 65628493 (-)
LOC110518541 LOC106566519 coding downstream 528345 65131650 ~ 65620292 (-)
ddx20 ddx20 coding upstream 120663 66269637 ~ 66276483 (-)
LOC110492566 LOC106566511 coding upstream 131982 66280956 ~ 66296439 (-)
b4galt3 b4galt3 coding upstream 154615 66303589 ~ 66308067 (-)
bgnb bgn coding upstream 171448 66320422 ~ 66345643 (-)
si:dkey-32e6.6 LOC106566508 coding upstream 233029 66382003 ~ 66421064 (-)
G1402492 NA non-coding downstream 103237 66045024 ~ 66045400 (-)
G1402485 NA non-coding downstream 112753 66035339 ~ 66035884 (-)
G1402442 NA non-coding downstream 178723 65969565 ~ 65969914 (-)
G1401717 NA non-coding downstream 215370 65932898 ~ 65933267 (-)
G1401702 NA non-coding downstream 244754 65903559 ~ 65903883 (-)
G1402585 NA non-coding upstream 52185 66201159 ~ 66201503 (-)
G1402588 NA non-coding upstream 56654 66205628 ~ 66206240 (-)
G1402604 NA non-coding upstream 85279 66234253 ~ 66317716 (-)
G1402620 NA non-coding upstream 150672 66299646 ~ 66301517 (-)
G1402659 NA non-coding upstream 210467 66359441 ~ 66376840 (-)
G1401617 NA other downstream 512265 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1700165 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1838181 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 1862644 64285628 ~ 64285993 (-)
G1402686 srpk3 other upstream 276577 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 335927 66484901 ~ 66494667 (-)
G1403498 NA other upstream 1294447 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2642215 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 3054312 69203286 ~ 69207158 (-)

Expression



Co-expression Network