G1402732


Basic Information

Item Value
gene id G1402732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66532648 ~ 66533823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1601973
CCAATACATTTACATGTTCCATCTCACGCATGATTTGTGTCGTTATTCTTTGTCGTAATTAAGCATAATCCATTGACTGCATTACCTTACGCTACAAAGGACACATTTTGAGCTTTAATCATATATTCATTAATACAGTTTACCCATACATATTTATCATTTTAATGTTCACTAAATGTCTGTGTGAAGACAAGGTTGTTTTGTTCCCTAATCAGAGCCATACCTTTTATTCTGTTTCGTAGTGTAGTGTATACTACAGACTCTGGTTTCATAGTGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACAGACTCTGGTTTCATAATGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACAGACTCTGGTTTCATAATGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACAGACTCTGGTTTCATAATGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACAGACTCTGGTTTCATAGTGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACTGACACTGGTTTCATAGTGTAGTGTATACTACACACCGTGGTTTCATAGTGTAGTGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACAGACACTGGTTTCATAGTGTATACTACACACCCTGGTTTCATAGTGTAGTGTATACTACACACCCTGGTTTCATAGTGTATACTACACACCGTGGTTTCATAGTGTAGTGTATACTACAGACACTGGTTTCATAGTGTAGTGTATACTACAGACACTGGTTTCATAGTGTAGTGTATACTACAGACCCTGGACCTAATGAGTTACCATGGTGATAACTGTATCATTCTGATTATGGCAGAAGCATAccattacatttgacattttagtcaataaacagacgctcttatccagagcctgGTACAGTTACTGCATTcgtcttaagatagctaggtgggacaaccacatatcacagtcatggtaagtacatttttccttaTTAAAGTAgcttatcagcaaagtcagagctagtaagggggAAAAAAGGTCAAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1601973 True 1144 lncRNA 0.38 2 66532648 66533823

Neighbor

gene id symbol gene type direction distance location
abt1 abt1 coding downstream 28693 66502032 ~ 66503955 (-)
cdk16 cdk16 coding downstream 53506 66442214 ~ 66479142 (-)
tsr2 tsr2 coding downstream 95746 66433948 ~ 66436902 (-)
si:dkey-32e6.6 LOC106566508 coding downstream 111584 66382003 ~ 66421064 (-)
bgnb bgn coding downstream 187005 66320422 ~ 66345643 (-)
zgc:86609 LOC106566500 coding upstream 49280 66583103 ~ 66587055 (-)
LOC118939570 NA coding upstream 164815 66698638 ~ 66706256 (-)
slc6a8 slc6a8 coding upstream 204503 66738326 ~ 66767036 (-)
LOC110492586 LOC106566493 coding upstream 288511 66822334 ~ 67012161 (-)
LOC110492588 LOC106566492 coding upstream 488112 67021935 ~ 67033045 (-)
G1402731 LOC106566502 non-coding downstream 683 66531356 ~ 66531965 (-)
G1402728 NA non-coding downstream 7556 66524726 ~ 66525092 (-)
G1402707 LOC106566505 non-coding downstream 37981 66484901 ~ 66494667 (-)
G1402659 NA non-coding downstream 155808 66359441 ~ 66376840 (-)
G1402739 NA non-coding upstream 13402 66547225 ~ 66547438 (-)
G1402741 NA non-coding upstream 15627 66549450 ~ 66549712 (-)
G1402742 NA non-coding upstream 16459 66550282 ~ 66550616 (-)
G1402743 NA non-coding upstream 17100 66550923 ~ 66551150 (-)
G1402746 LOC106566502 non-coding upstream 22308 66556131 ~ 66556730 (-)
G1402686 srpk3 other downstream 106326 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 778038 65715711 ~ 65754610 (-)
G1401617 NA other downstream 896276 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 2084176 64445355 ~ 64485638 (-)
G1403498 NA other upstream 909598 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2257366 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 2669463 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 2744004 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2983932 69517755 ~ 69518113 (-)

Expression


Co-expression Network