Gene
RNA
| Item | Value |
|---|---|
| gene id | G1402063 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 66539164 ~ 66539571 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107675252 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1601179 | True | 408 | lncRNA | 0.43 | 1 | 66539164 | 66539571 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| comta | LOC106566505 | coding | upstream | 44479 | 66477277 ~ 66494685 (+) |
| srpk3 | srpk3 | coding | upstream | 104253 | 66423889 ~ 66434911 (+) |
| LOC110492564 | LOC102303593 | coding | upstream | 274065 | 65996027 ~ 66267216 (+) |
| capza1b | capza1 | coding | upstream | 885227 | 65648356 ~ 65653937 (+) |
| cacna2d3a | LOC102307471 | coding | upstream | 1502881 | 64722542 ~ 65037527 (+) |
| usp11 | usp11 | coding | downstream | 29905 | 66569476 ~ 66582944 (+) |
| uxt | uxt | coding | downstream | 58066 | 66597637 ~ 66599559 (+) |
| elk1 | LOC106566498 | coding | downstream | 60391 | 66599962 ~ 66621991 (+) |
| si:ch211-180f4.1 | LOC106566497 | coding | downstream | 100662 | 66640233 ~ 66653854 (+) |
| otud5a | otud5 | coding | downstream | 119438 | 66659009 ~ 66683358 (+) |
| G1402054 | NA | non-coding | upstream | 21465 | 66514792 ~ 66517699 (+) |
| G1402026 | NA | non-coding | upstream | 84242 | 66448747 ~ 66454922 (+) |
| G1401993 | NA | non-coding | upstream | 144878 | 66393896 ~ 66394286 (+) |
| G1401946 | NA | non-coding | upstream | 216576 | 66320424 ~ 66322588 (+) |
| G1401952 | NA | non-coding | upstream | 225618 | 66313205 ~ 66313546 (+) |
| G1402067 | NA | non-coding | downstream | 4478 | 66544049 ~ 66544384 (+) |
| G1402092 | NA | non-coding | downstream | 55996 | 66595567 ~ 66596205 (+) |
| G1402098 | NA | non-coding | downstream | 87993 | 66627564 ~ 66627883 (+) |
| G1402099 | NA | non-coding | downstream | 89564 | 66629135 ~ 66629342 (+) |
| G1401782 | NA | other | upstream | 514919 | 66019001 ~ 66024245 (+) |
| G1401354 | NA | other | upstream | 642101 | 65895891 ~ 65897063 (+) |
| G1401074 | NA | other | upstream | 1280320 | 65258515 ~ 65258844 (+) |
| G1401041 | NA | other | upstream | 1348889 | 65189990 ~ 65190275 (+) |
| G1400202 | LOC106566541 | other | upstream | 2064876 | 64473548 ~ 64476421 (+) |
| G1402066 | NA | other | downstream | 3740 | 66543311 ~ 66543685 (+) |
| G1402256 | NA | other | downstream | 374794 | 66914365 ~ 66914716 (+) |
| LOC110492593 | LOC105017353 | other | downstream | 932373 | 67459278 ~ 67476876 (+) |
| G1403412 | LOC106566473 | other | downstream | 1113497 | 67653068 ~ 67653447 (+) |
| G1403463 | NA | other | downstream | 1199391 | 67738962 ~ 67739702 (+) |
