Gene
RNA
| Item | Value |
|---|---|
| gene id | G1402742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 66550282 ~ 66550616 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1601983 | True | 250 | lncRNA | 0.41 | 2 | 66550282 | 66550616 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| abt1 | abt1 | coding | downstream | 46327 | 66502032 ~ 66503955 (-) |
| cdk16 | cdk16 | coding | downstream | 71140 | 66442214 ~ 66479142 (-) |
| tsr2 | tsr2 | coding | downstream | 113380 | 66433948 ~ 66436902 (-) |
| si:dkey-32e6.6 | LOC106566508 | coding | downstream | 129218 | 66382003 ~ 66421064 (-) |
| bgnb | bgn | coding | downstream | 204639 | 66320422 ~ 66345643 (-) |
| zgc:86609 | LOC106566500 | coding | upstream | 32487 | 66583103 ~ 66587055 (-) |
| LOC118939570 | NA | coding | upstream | 148022 | 66698638 ~ 66706256 (-) |
| slc6a8 | slc6a8 | coding | upstream | 187710 | 66738326 ~ 66767036 (-) |
| LOC110492586 | LOC106566493 | coding | upstream | 271718 | 66822334 ~ 67012161 (-) |
| LOC110492588 | LOC106566492 | coding | upstream | 471319 | 67021935 ~ 67033045 (-) |
| G1402741 | NA | non-coding | downstream | 570 | 66549450 ~ 66549712 (-) |
| G1402739 | NA | non-coding | downstream | 2844 | 66547225 ~ 66547438 (-) |
| G1402732 | NA | non-coding | downstream | 16459 | 66532648 ~ 66533823 (-) |
| G1402731 | LOC106566502 | non-coding | downstream | 18317 | 66531356 ~ 66531965 (-) |
| G1402728 | NA | non-coding | downstream | 25190 | 66524726 ~ 66525092 (-) |
| G1402743 | NA | non-coding | upstream | 307 | 66550923 ~ 66551150 (-) |
| G1402746 | LOC106566502 | non-coding | upstream | 5515 | 66556131 ~ 66556730 (-) |
| G1402782 | NA | non-coding | upstream | 38681 | 66589297 ~ 66589631 (-) |
| G1402783 | NA | non-coding | upstream | 40529 | 66591145 ~ 66591348 (-) |
| G1402787 | NA | non-coding | upstream | 50541 | 66601157 ~ 66601881 (-) |
| G1402707 | LOC106566505 | other | downstream | 55615 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 123960 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 795672 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 913910 | 65635482 ~ 65636372 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 2101810 | 64445355 ~ 64485638 (-) |
| G1403498 | NA | other | upstream | 892805 | 67443421 ~ 67444179 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 2240573 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 2652670 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 2727211 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 2967139 | 69517755 ~ 69518113 (-) |
