Gene
RNA
| Item | Value |
|---|---|
| gene id | G1402783 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 66591145 ~ 66591348 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1602026 | True | 204 | lncRNA | 0.47 | 1 | 66591145 | 66591348 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:86609 | LOC106566500 | coding | downstream | 4090 | 66583103 ~ 66587055 (-) |
| abt1 | abt1 | coding | downstream | 87190 | 66502032 ~ 66503955 (-) |
| cdk16 | cdk16 | coding | downstream | 112003 | 66442214 ~ 66479142 (-) |
| tsr2 | tsr2 | coding | downstream | 154243 | 66433948 ~ 66436902 (-) |
| si:dkey-32e6.6 | LOC106566508 | coding | downstream | 170081 | 66382003 ~ 66421064 (-) |
| LOC118939570 | NA | coding | upstream | 107290 | 66698638 ~ 66706256 (-) |
| slc6a8 | slc6a8 | coding | upstream | 146978 | 66738326 ~ 66767036 (-) |
| LOC110492586 | LOC106566493 | coding | upstream | 230986 | 66822334 ~ 67012161 (-) |
| LOC110492588 | LOC106566492 | coding | upstream | 430587 | 67021935 ~ 67033045 (-) |
| LOC110492592 | LOC106566478 | coding | upstream | 880596 | 67471944 ~ 67492651 (-) |
| G1402782 | NA | non-coding | downstream | 1514 | 66589297 ~ 66589631 (-) |
| G1402746 | LOC106566502 | non-coding | downstream | 34415 | 66556131 ~ 66556730 (-) |
| G1402743 | NA | non-coding | downstream | 39995 | 66550923 ~ 66551150 (-) |
| G1402742 | NA | non-coding | downstream | 40529 | 66550282 ~ 66550616 (-) |
| G1402741 | NA | non-coding | downstream | 41433 | 66549450 ~ 66549712 (-) |
| G1402787 | NA | non-coding | upstream | 9809 | 66601157 ~ 66601881 (-) |
| G1402790 | NA | non-coding | upstream | 12858 | 66604206 ~ 66605461 (-) |
| G1402792 | NA | non-coding | upstream | 16339 | 66607687 ~ 66607942 (-) |
| G1402793 | NA | non-coding | upstream | 18003 | 66609351 ~ 66609552 (-) |
| G1402794 | NA | non-coding | upstream | 18213 | 66609561 ~ 66609788 (-) |
| G1402707 | LOC106566505 | other | downstream | 96478 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 164823 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 836535 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 954773 | 65635482 ~ 65636372 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 2142673 | 64445355 ~ 64485638 (-) |
| G1403498 | NA | other | upstream | 852073 | 67443421 ~ 67444179 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 2199841 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 2611938 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 2686479 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 2926407 | 69517755 ~ 69518113 (-) |
