G1402916



Basic Information


Item Value
gene id G1402916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66835794 ~ 66836024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1602163
ACTGACAGCTCtgtggtttctccctccccagatAGTCCCTCTCTAGTACTGACAGCTCtgtggtttctccctccccagatAGTCCCTCTGGTACTGACAGCTCtgtggtttctccctccccagatAGTCCCTCTGGTACTGACAGCTCtgtggtttctccctccccagatAGTCCCTCTCTAGTACTGACAGCTCtgtggtttctccctccccagatAGTCCCTCTAGTAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1602163 True 231 lncRNA 0.54 1 66835794 66836024

Neighbor


gene id symbol gene type direction distance location
slc6a8 slc6a8 coding downstream 68758 66738326 ~ 66767036 (-)
LOC118939570 NA coding downstream 129538 66698638 ~ 66706256 (-)
zgc:86609 LOC106566500 coding downstream 248739 66583103 ~ 66587055 (-)
abt1 abt1 coding downstream 331839 66502032 ~ 66503955 (-)
cdk16 cdk16 coding downstream 356652 66442214 ~ 66479142 (-)
LOC110492588 LOC106566492 coding upstream 185911 67021935 ~ 67033045 (-)
LOC110492592 LOC106566478 coding upstream 635920 67471944 ~ 67492651 (-)
LOC110492594 LOC106566480 coding upstream 663641 67499665 ~ 67510144 (-)
LOC110492595 LOC106566479 coding upstream 676474 67512498 ~ 67571087 (-)
LOC118939572 NA coding upstream 737697 67573165 ~ 67604966 (-)
G1402914 NA non-coding downstream 4849 66830701 ~ 66830945 (-)
LOC110492586 LOC106566493 non-coding downstream 10817 66822334 ~ 67012161 (-)
G1402906 NA non-coding downstream 16539 66819021 ~ 66819255 (-)
G1402888 NA non-coding downstream 38441 66797145 ~ 66797353 (-)
G1402855 NA non-coding downstream 99113 66736370 ~ 66736681 (-)
G1402918 NA non-coding upstream 6722 66842746 ~ 66842972 (-)
G1402919 NA non-coding upstream 12321 66848345 ~ 66848616 (-)
G1402922 NA non-coding upstream 18641 66854665 ~ 66854879 (-)
G1402931 NA non-coding upstream 46128 66882152 ~ 66882407 (-)
G1402936 NA non-coding upstream 55540 66891564 ~ 66891844 (-)
G1402707 LOC106566505 other downstream 341127 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 409472 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 1081184 65715711 ~ 65754610 (-)
G1401617 NA other downstream 1199422 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 2387322 64445355 ~ 64485638 (-)
G1403498 NA other upstream 607397 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 1955165 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 2367262 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 2441803 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2681731 69517755 ~ 69518113 (-)

Expression



Co-expression Network