Gene
RNA
| Item | Value |
|---|---|
| gene id | G1402918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 66842746 ~ 66842972 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: death-inducer obliterator 1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1602165 | True | 227 | lncRNA | 0.51 | 1 | 66842746 | 66842972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc6a8 | slc6a8 | coding | downstream | 75710 | 66738326 ~ 66767036 (-) |
| LOC118939570 | NA | coding | downstream | 136490 | 66698638 ~ 66706256 (-) |
| zgc:86609 | LOC106566500 | coding | downstream | 255691 | 66583103 ~ 66587055 (-) |
| abt1 | abt1 | coding | downstream | 338791 | 66502032 ~ 66503955 (-) |
| cdk16 | cdk16 | coding | downstream | 363604 | 66442214 ~ 66479142 (-) |
| LOC110492588 | LOC106566492 | coding | upstream | 178963 | 67021935 ~ 67033045 (-) |
| LOC110492592 | LOC106566478 | coding | upstream | 628972 | 67471944 ~ 67492651 (-) |
| LOC110492594 | LOC106566480 | coding | upstream | 656693 | 67499665 ~ 67510144 (-) |
| LOC110492595 | LOC106566479 | coding | upstream | 669526 | 67512498 ~ 67571087 (-) |
| LOC118939572 | NA | coding | upstream | 730749 | 67573165 ~ 67604966 (-) |
| G1402916 | NA | non-coding | downstream | 6722 | 66835794 ~ 66836024 (-) |
| G1402914 | NA | non-coding | downstream | 11801 | 66830701 ~ 66830945 (-) |
| LOC110492586 | LOC106566493 | non-coding | downstream | 17769 | 66822334 ~ 67012161 (-) |
| G1402906 | NA | non-coding | downstream | 23491 | 66819021 ~ 66819255 (-) |
| G1402888 | NA | non-coding | downstream | 45393 | 66797145 ~ 66797353 (-) |
| G1402919 | NA | non-coding | upstream | 5373 | 66848345 ~ 66848616 (-) |
| G1402922 | NA | non-coding | upstream | 11693 | 66854665 ~ 66854879 (-) |
| G1402931 | NA | non-coding | upstream | 39180 | 66882152 ~ 66882407 (-) |
| G1402936 | NA | non-coding | upstream | 48592 | 66891564 ~ 66891844 (-) |
| G1402938 | NA | non-coding | upstream | 57110 | 66900082 ~ 66903495 (-) |
| G1402707 | LOC106566505 | other | downstream | 348079 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 416424 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 1088136 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 1206374 | 65635482 ~ 65636372 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 2394274 | 64445355 ~ 64485638 (-) |
| G1403498 | NA | other | upstream | 600449 | 67443421 ~ 67444179 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 1948217 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 2360314 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 2434855 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 2674783 | 69517755 ~ 69518113 (-) |
