G1402922



Basic Information


Item Value
gene id G1402922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 66854665 ~ 66854879 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1602169
TTCCTATACAGTGCCAGCTGTCAAGACAACCACGGCTCAGAATGATTAGAAGTAGGTAGATTTAGTCCTGGAGTGTGGCAGCTTGTTTACCTTTTGTATCAAAGGTCCTGATCTCATGGTATTGACTTGACACTAACACGCCTGGACGAGGTAACTGACTGTTGATTCAGTGAAACGCTCAGACTTTAATTTAATCCGATCAATAGAGTCAActg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1602169 True 215 lncRNA 0.43 1 66854665 66854879

Neighbor


gene id symbol gene type direction distance location
slc6a8 slc6a8 coding downstream 87629 66738326 ~ 66767036 (-)
LOC118939570 NA coding downstream 148409 66698638 ~ 66706256 (-)
zgc:86609 LOC106566500 coding downstream 267610 66583103 ~ 66587055 (-)
abt1 abt1 coding downstream 350710 66502032 ~ 66503955 (-)
cdk16 cdk16 coding downstream 375523 66442214 ~ 66479142 (-)
LOC110492588 LOC106566492 coding upstream 167056 67021935 ~ 67033045 (-)
LOC110492592 LOC106566478 coding upstream 617065 67471944 ~ 67492651 (-)
LOC110492594 LOC106566480 coding upstream 644786 67499665 ~ 67510144 (-)
LOC110492595 LOC106566479 coding upstream 657619 67512498 ~ 67571087 (-)
LOC118939572 NA coding upstream 718842 67573165 ~ 67604966 (-)
G1402919 NA non-coding downstream 6049 66848345 ~ 66848616 (-)
G1402918 NA non-coding downstream 11693 66842746 ~ 66842972 (-)
G1402916 NA non-coding downstream 18641 66835794 ~ 66836024 (-)
G1402914 NA non-coding downstream 23720 66830701 ~ 66830945 (-)
LOC110492586 LOC106566493 non-coding downstream 29688 66822334 ~ 67012161 (-)
G1402931 NA non-coding upstream 27273 66882152 ~ 66882407 (-)
G1402936 NA non-coding upstream 36685 66891564 ~ 66891844 (-)
G1402938 NA non-coding upstream 45203 66900082 ~ 66903495 (-)
G1402940 NA non-coding upstream 51234 66906113 ~ 66906649 (-)
G1402941 NA non-coding upstream 58274 66913153 ~ 66913405 (-)
G1402707 LOC106566505 other downstream 359998 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 428343 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 1100055 65715711 ~ 65754610 (-)
G1401617 NA other downstream 1218293 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 2406193 64445355 ~ 64485638 (-)
G1403498 NA other upstream 588542 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 1936310 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 2348407 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 2422948 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2662876 69517755 ~ 69518113 (-)

Expression



Co-expression Network