Gene
RNA
| Item | Value |
|---|---|
| gene id | G1402325 |
| gene name | LOC106566492 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 67023337 ~ 67025429 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tyrosine-protein phosphatase non-receptor type 18-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1601489 | True | 656 | lncRNA | 0.48 | 2 | 67023337 | 67025429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bcap31 | bcap31 | coding | upstream | 296921 | 66703053 ~ 66726416 (+) |
| slc35a2 | slc35a2 | coding | upstream | 321667 | 66689062 ~ 66701670 (+) |
| pim2 | pim1 | coding | upstream | 335261 | 66684106 ~ 66688076 (+) |
| otud5a | otud5 | coding | upstream | 339979 | 66659009 ~ 66683358 (+) |
| si:ch211-180f4.1 | LOC106566497 | coding | upstream | 369483 | 66640233 ~ 66653854 (+) |
| LOC110492587 | gripap1 | coding | downstream | 8970 | 67034399 ~ 67128826 (+) |
| LOC118939477 | NA | coding | downstream | 107681 | 67133110 ~ 67147363 (+) |
| LOC110492589 | kcnd1 | coding | downstream | 146401 | 67171830 ~ 67251627 (+) |
| LOC110492590 | LOC106566489 | coding | downstream | 234620 | 67260049 ~ 67275741 (+) |
| pim1 | LOC106566482 | coding | downstream | 373432 | 67398861 ~ 67402310 (+) |
| G1402323 | NA | non-coding | upstream | 4689 | 67018349 ~ 67018648 (+) |
| G1402254 | NA | non-coding | upstream | 110911 | 66912211 ~ 66912426 (+) |
| G1402253 | NA | non-coding | upstream | 111480 | 66911635 ~ 66911857 (+) |
| G1402249 | NA | non-coding | upstream | 130647 | 66892469 ~ 66892690 (+) |
| G1402246 | NA | non-coding | upstream | 137359 | 66885754 ~ 66885978 (+) |
| G1402364 | NA | non-coding | downstream | 99213 | 67124642 ~ 67125042 (+) |
| G1402397 | NA | non-coding | downstream | 144008 | 67169437 ~ 67170722 (+) |
| G1402399 | NA | non-coding | downstream | 227308 | 67252737 ~ 67253139 (+) |
| G1402256 | NA | other | upstream | 108621 | 66914365 ~ 66914716 (+) |
| G1402066 | NA | other | upstream | 479652 | 66543311 ~ 66543685 (+) |
| G1401782 | NA | other | upstream | 999092 | 66019001 ~ 66024245 (+) |
| G1401354 | NA | other | upstream | 1126274 | 65895891 ~ 65897063 (+) |
| G1401074 | NA | other | upstream | 1764493 | 65258515 ~ 65258844 (+) |
| LOC110492593 | LOC105017353 | other | downstream | 446515 | 67459278 ~ 67476876 (+) |
| G1403412 | LOC106566473 | other | downstream | 627639 | 67653068 ~ 67653447 (+) |
| G1403463 | NA | other | downstream | 713533 | 67738962 ~ 67739702 (+) |
| G1403655 | LOC106566486 | other | downstream | 748127 | 67773293 ~ 67777491 (+) |
| G1404105 | NA | other | downstream | 1264086 | 68289515 ~ 68290086 (+) |
