G1403153


Basic Information

Item Value
gene id G1403153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67274695 ~ 67275137 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602427
GTGTTAATATAAACCCTATCAGCAAAACACCATAATCACCTCTCATGGTTCTGTTAGACAACAGATCACGTCAAGCCTCCACGTTGCTCACTTCTGACCATCAGGCTCCAGGTAATCCTCGTCATCATGGATCGCCAGGCATTTGGGCTTGGGTCTCTCGTGGACCTCTGCAATCTCCTCTCTGGTCTCAGCTGGCGTGATCATTGACACCACATCATCGTAGCTCTCCTGTTGATCTTCCTCCACCTCGTAGGTTGCAtgttctgtaaaaaatgtggtACAGAGCAACACATAAAGAATAGTATAATCTAAGCTATTTAGCAGCCACTTTGTATCCAAAGCGACTTgtagtcatgcatgcatacatttttcatatgTGTGACCTCAGTGGGAAACAATCCCAAGACCCTCAGTGTTGTAAGCACCATTCTTTACCAACGGAG

Function

NR:

description
scavenger receptor cysteine-rich type 1 protein M130-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602427 True 443 lncRNA 0.45 1 67274695 67275137

Neighbor

gene id symbol gene type direction distance location
LOC110492588 LOC106566492 coding downstream 241650 67021935 ~ 67033045 (-)
LOC110492586 LOC106566493 coding downstream 262534 66822334 ~ 67012161 (-)
slc6a8 slc6a8 coding downstream 507659 66738326 ~ 66767036 (-)
LOC118939570 NA coding downstream 568439 66698638 ~ 66706256 (-)
zgc:86609 LOC106566500 coding downstream 687640 66583103 ~ 66587055 (-)
LOC110492592 LOC106566478 coding upstream 196807 67471944 ~ 67492651 (-)
LOC110492594 LOC106566480 coding upstream 224528 67499665 ~ 67510144 (-)
LOC110492595 LOC106566479 coding upstream 237361 67512498 ~ 67571087 (-)
LOC118939572 NA coding upstream 298584 67573165 ~ 67604966 (-)
LOC110491154 LOC106566473 coding upstream 333687 67608824 ~ 67772580 (-)
G1403151 NA non-coding downstream 3143 67271270 ~ 67271552 (-)
G1403154 LOC106566489 non-coding downstream 3570 67270860 ~ 67271125 (-)
G1403150 LOC106566489 non-coding downstream 4563 67269856 ~ 67270132 (-)
G1403149 LOC106566489 non-coding downstream 5138 67269098 ~ 67269557 (-)
G1403148 LOC106566489 non-coding downstream 5728 67268659 ~ 67268967 (-)
G1403152 NA non-coding upstream 233 67275370 ~ 67275809 (-)
G1403160 NA non-coding upstream 3731 67278868 ~ 67279287 (-)
G1403166 NA non-coding upstream 7064 67282201 ~ 67282424 (-)
G1403168 NA non-coding upstream 9385 67284522 ~ 67284956 (-)
G1403171 NA non-coding upstream 11580 67286717 ~ 67286922 (-)
G1402707 LOC106566505 other downstream 780028 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 848373 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 1520085 65715711 ~ 65754610 (-)
G1401617 NA other downstream 1638323 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 2826223 64445355 ~ 64485638 (-)
G1403498 NA other upstream 168284 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 1516052 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 1928149 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 2002690 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2242618 69517755 ~ 69518113 (-)

Expression


Co-expression Network