G1403158


Basic Information

Item Value
gene id G1403158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67277747 ~ 67278061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602432
AGTTAATTGAATATTTAAACTTATGGATAAAACAATGTTAAAACTATTAATGTTATTGCATTTAATTACACTCCAATTAATATATAAATTAAAATGCAATTAACTAAGACCCTGCAGTTTGTGGAACTAACTGCTGAAATGTCAACCAGCTAACCTCTTCCACTAGATATTCAAAACAACAGCTCTGACATCACTAGCCTGCCGTGGCCAGTTGCTGTCATTTTCATAGACAGCTTTGTTGGCCTTGGACAAAGTAGGTGGAGCAAACTGCTGTGAAATGTTTCTTTATCTCATCACAGGTGCCTTTTGATTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602432 True 315 lncRNA 0.35 1 67277747 67278061

Neighbor

gene id symbol gene type direction distance location
LOC110492590 LOC106566489 coding upstream 2006 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 26120 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 130384 67133110 ~ 67147363 (+)
LOC110492587 gripap1 coding upstream 148921 67034399 ~ 67128826 (+)
bcap31 bcap31 coding upstream 551331 66703053 ~ 66726416 (+)
pim1 LOC106566482 coding downstream 120800 67398861 ~ 67402310 (+)
LOC110492593 LOC105017353 coding downstream 181217 67459278 ~ 67476876 (+)
LOC110492619 LOC106566466 coding downstream 997434 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 1022967 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 1070712 68348773 ~ 68357169 (+)
G1403135 NA non-coding upstream 1583 67275951 ~ 67276164 (+)
G1402399 NA non-coding upstream 24608 67252737 ~ 67253139 (+)
G1402397 NA non-coding upstream 107025 67169437 ~ 67170722 (+)
G1402364 NA non-coding upstream 152705 67124642 ~ 67125042 (+)
G1403167 NA non-coding downstream 4657 67282718 ~ 67282997 (+)
G1403184 NA non-coding downstream 23647 67301708 ~ 67301960 (+)
G1403228 NA non-coding downstream 58850 67336911 ~ 67337154 (+)
G1403232 NA non-coding downstream 61559 67339620 ~ 67339949 (+)
G1403245 NA non-coding downstream 70382 67348443 ~ 67354726 (+)
G1402256 NA other upstream 363031 66914365 ~ 66914716 (+)
G1402066 NA other upstream 734062 66543311 ~ 66543685 (+)
G1401782 NA other upstream 1253502 66019001 ~ 66024245 (+)
G1401354 NA other upstream 1380684 65895891 ~ 65897063 (+)
G1401074 NA other upstream 2018903 65258515 ~ 65258844 (+)
G1403412 LOC106566473 other downstream 375007 67653068 ~ 67653447 (+)
G1403463 NA other downstream 460901 67738962 ~ 67739702 (+)
G1403655 LOC106566486 other downstream 495495 67773293 ~ 67777491 (+)
G1404105 NA other downstream 1011454 68289515 ~ 68290086 (+)

Expression


Co-expression Network