Gene
RNA
| Item | Value |
|---|---|
| gene id | G1403160 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 67278868 ~ 67279287 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1602434 | True | 420 | lncRNA | 0.38 | 1 | 67278868 | 67279287 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492588 | LOC106566492 | coding | downstream | 245823 | 67021935 ~ 67033045 (-) |
| LOC110492586 | LOC106566493 | coding | downstream | 266707 | 66822334 ~ 67012161 (-) |
| slc6a8 | slc6a8 | coding | downstream | 511832 | 66738326 ~ 66767036 (-) |
| LOC118939570 | NA | coding | downstream | 572612 | 66698638 ~ 66706256 (-) |
| zgc:86609 | LOC106566500 | coding | downstream | 691813 | 66583103 ~ 66587055 (-) |
| LOC110492592 | LOC106566478 | coding | upstream | 192657 | 67471944 ~ 67492651 (-) |
| LOC110492594 | LOC106566480 | coding | upstream | 220378 | 67499665 ~ 67510144 (-) |
| LOC110492595 | LOC106566479 | coding | upstream | 233211 | 67512498 ~ 67571087 (-) |
| LOC118939572 | NA | coding | upstream | 294434 | 67573165 ~ 67604966 (-) |
| LOC110491154 | LOC106566473 | coding | upstream | 329537 | 67608824 ~ 67772580 (-) |
| G1403152 | NA | non-coding | downstream | 3059 | 67275370 ~ 67275809 (-) |
| G1403153 | NA | non-coding | downstream | 3731 | 67274695 ~ 67275137 (-) |
| G1403151 | NA | non-coding | downstream | 7316 | 67271270 ~ 67271552 (-) |
| G1403154 | LOC106566489 | non-coding | downstream | 7743 | 67270860 ~ 67271125 (-) |
| G1403150 | LOC106566489 | non-coding | downstream | 8736 | 67269856 ~ 67270132 (-) |
| G1403166 | NA | non-coding | upstream | 2914 | 67282201 ~ 67282424 (-) |
| G1403168 | NA | non-coding | upstream | 5235 | 67284522 ~ 67284956 (-) |
| G1403171 | NA | non-coding | upstream | 7430 | 67286717 ~ 67286922 (-) |
| G1403192 | NA | non-coding | upstream | 30594 | 67309881 ~ 67310510 (-) |
| G1403200 | NA | non-coding | upstream | 36873 | 67316160 ~ 67316477 (-) |
| G1402707 | LOC106566505 | other | downstream | 784201 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 852546 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 1524258 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 1642496 | 65635482 ~ 65636372 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 2830396 | 64445355 ~ 64485638 (-) |
| G1403498 | NA | other | upstream | 164134 | 67443421 ~ 67444179 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 1511902 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 1923999 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 1998540 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 2238468 | 69517755 ~ 69518113 (-) |
