G1403192


Basic Information

Item Value
gene id G1403192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67309881 ~ 67310510 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602466
gttggaggtcctgacgaaccacgtccagataaagcatcatgttaatgttactacttagcttcggctgttggaggtcctgacgaaccacgtccagataaagcatcatgttaatgttactacttagctccGGCTGTTgtaggtcctgacgaaccacgtccagataaagcatcatgttaatgttactacttagctccGGCTGTTgtaggtcctgacgaaccacgtccagataaagcatcatgttaatgttactacttagcttcggttGTTGGAGgtcctgacgaaccacgtccagataaagcatcatgttaatgttactacttagcttcggctgttggaggtcctgtcgaaccacgtccagataaagcatcatgttaatgttactacttagctccggctggtggaggtcctgacgaaccatgtccagataaagcatcatgttaatgttactacttagcttcggctgttggaggtcctgatgaaccacgtccagataaagcatcatgttaatgttactacttagcttcggctgttggaggtcctgacgaaccacgtccagataaagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602466 True 564 lncRNA 0.46 2 67309881 67310510

Neighbor

gene id symbol gene type direction distance location
LOC110492588 LOC106566492 coding downstream 276836 67021935 ~ 67033045 (-)
LOC110492586 LOC106566493 coding downstream 297720 66822334 ~ 67012161 (-)
slc6a8 slc6a8 coding downstream 542845 66738326 ~ 66767036 (-)
LOC118939570 NA coding downstream 603625 66698638 ~ 66706256 (-)
zgc:86609 LOC106566500 coding downstream 722826 66583103 ~ 66587055 (-)
LOC110492592 LOC106566478 coding upstream 161434 67471944 ~ 67492651 (-)
LOC110492594 LOC106566480 coding upstream 189155 67499665 ~ 67510144 (-)
LOC110492595 LOC106566479 coding upstream 201988 67512498 ~ 67571087 (-)
LOC118939572 NA coding upstream 263211 67573165 ~ 67604966 (-)
LOC110491154 LOC106566473 coding upstream 298314 67608824 ~ 67772580 (-)
G1403171 NA non-coding downstream 22959 67286717 ~ 67286922 (-)
G1403168 NA non-coding downstream 24925 67284522 ~ 67284956 (-)
G1403166 NA non-coding downstream 27457 67282201 ~ 67282424 (-)
G1403160 NA non-coding downstream 30594 67278868 ~ 67279287 (-)
G1403152 NA non-coding downstream 34072 67275370 ~ 67275809 (-)
G1403200 NA non-coding upstream 5650 67316160 ~ 67316477 (-)
G1403212 NA non-coding upstream 12444 67322954 ~ 67323258 (-)
G1403214 NA non-coding upstream 15548 67326058 ~ 67326266 (-)
G1403256 NA non-coding upstream 49528 67360038 ~ 67360305 (-)
G1403259 NA non-coding upstream 52569 67363079 ~ 67364250 (-)
G1402707 LOC106566505 other downstream 815214 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 883559 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 1555271 65715711 ~ 65754610 (-)
G1401617 NA other downstream 1673509 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 2861409 64445355 ~ 64485638 (-)
G1403498 NA other upstream 132911 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 1480679 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 1892776 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 1967317 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2207245 69517755 ~ 69518113 (-)

Expression


Co-expression Network