G1403504


Basic Information

Item Value
gene id G1403504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67460247 ~ 67461402 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602812
ctttgcacactcttggcattatctcaaccagcttcacctggaatgctttttccaatagtcttgaaggaggtccgacatatgctgagcacttgttggctgcttttccttcactctgtggtccaactcaacCCAAACTATCTacattgggttgaggttgggtgattgtggaggcctggtcatctgatgcagccctccatcactctccttcttggtgaaatagcccttacacagcctggaggtgtgttggatcattgtcctgttgaaaaacaaatgataatcccactaagcacataccagatgggatggcatattgctgtagcatgctgtggtagccatgctggttaagtgtgccttgaattcgaaatatatcaccgacagtgtcaccaacaaagcaccatcacacctccacctccatgcttcatggtgggaactacacatcctttcacctactcttcATCTCACATAGACatggcggttagaaccaaaaatctcaaatttggagtcatcagaccaaaggccagatttccaccagtctattgtccattgcttgtgtttcttggcccaagcaagtctcttcttcttattgcagCAATTCacccatgaaggcctgattcacgcagactcctctgaacagttgatgttgagatgtgtctgttacttgaactctgtgaagcttttatttgggctgcaatttctgaggctgataactctaatgaacctatcctctgcagcagaggtaactctgggtcttcctttcctgtggcggtcctcatgagagccagtttcatcatagcgcttgatagtttttaCTCTAaaaattcttgaaatgttccagattgactgactttcatgtctcaaagtaatgatggactgatgtttctctttgcttatttgagctgttcttgccataatatggacttggtcttttaccaaatagggttattttctgtataccacccctaccttgtcacaacataacagattggctcaaacacattaagaagggaagacattccacaaattaacttttaacaaggcacacctgttaattgaaatgcattccaagtgactgcctcctgaagctggttgagagaatgcgaagagtgtgcaaatctgtcatcaagaaaaagggtggctactttgaggaatctcaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602812 True 1156 lncRNA 0.43 1 67460247 67461402

Neighbor

gene id symbol gene type direction distance location
LOC110492588 LOC106566492 coding downstream 427202 67021935 ~ 67033045 (-)
LOC110492586 LOC106566493 coding downstream 448086 66822334 ~ 67012161 (-)
slc6a8 slc6a8 coding downstream 693211 66738326 ~ 66767036 (-)
LOC118939570 NA coding downstream 753991 66698638 ~ 66706256 (-)
zgc:86609 LOC106566500 coding downstream 873192 66583103 ~ 66587055 (-)
LOC110492592 LOC106566478 coding upstream 10542 67471944 ~ 67492651 (-)
LOC110492594 LOC106566480 coding upstream 38263 67499665 ~ 67510144 (-)
LOC110492595 LOC106566479 coding upstream 51096 67512498 ~ 67571087 (-)
LOC118939572 NA coding upstream 112319 67573165 ~ 67604966 (-)
LOC110491154 LOC106566473 coding upstream 147422 67608824 ~ 67772580 (-)
G1403478 NA non-coding downstream 54079 67405788 ~ 67406168 (-)
G1403477 NA non-coding downstream 54694 67405191 ~ 67405553 (-)
G1403280 NA non-coding downstream 77368 67382661 ~ 67382879 (-)
G1403277 NA non-coding downstream 79207 67380769 ~ 67381040 (-)
G1403261 NA non-coding downstream 95126 67364805 ~ 67365121 (-)
G1403503 NA non-coding upstream 960 67462362 ~ 67462944 (-)
G1403527 NA non-coding upstream 46957 67508359 ~ 67519914 (-)
G1403535 NA non-coding upstream 63088 67524490 ~ 67524816 (-)
G1403507 NA non-coding upstream 109987 67571389 ~ 67572065 (-)
G1403514 NA non-coding upstream 111050 67572452 ~ 67572904 (-)
G1403498 NA other downstream 16068 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 965580 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 1033925 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 1705637 65715711 ~ 65754610 (-)
G1401617 NA other downstream 1823875 65635482 ~ 65636372 (-)
LOC118939478 LOC106566484 other upstream 1329787 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 1741884 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 1816425 69277827 ~ 69280359 (-)
G1405172 NA other upstream 2056353 69517755 ~ 69518113 (-)
G1405917 NA other upstream 2617255 70078657 ~ 70095541 (-)

Expression


Co-expression Network