G1403329


Basic Information

Item Value
gene id G1403329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67484115 ~ 67486897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602619
gtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatataacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgatgaatataacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatacaacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttacagtgtactgctgaatataacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttacagtgtactgctgaatataacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatacaacaggtgtagtagaccttactgctgaatataacaggtgtagtagaccttactgctgaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613386

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602619 True 1109 lncRNA 0.41 2 67484115 67486897

Neighbor

gene id symbol gene type direction distance location
LOC110492593 LOC105017353 coding upstream 10422 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 81805 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 208374 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 232488 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 336752 67133110 ~ 67147363 (+)
LOC110492619 LOC106566466 coding downstream 788598 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 814131 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 861876 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 909865 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 935216 68422113 ~ 68431744 (+)
G1403317 NA non-coding upstream 44917 67438883 ~ 67439198 (+)
G1403313 NA non-coding upstream 54212 67428739 ~ 67429903 (+)
G1403308 NA non-coding upstream 63801 67415997 ~ 67420314 (+)
G1403255 NA non-coding upstream 123758 67359952 ~ 67360357 (+)
G1403245 NA non-coding upstream 129389 67348443 ~ 67354726 (+)
G1403379 NA non-coding downstream 84557 67571454 ~ 67572112 (+)
G1403378 NA non-coding downstream 85447 67572344 ~ 67572923 (+)
G1403394 NA non-coding downstream 121945 67608842 ~ 67612830 (+)
G1403408 NA non-coding downstream 161817 67648714 ~ 67649155 (+)
G1403414 NA non-coding downstream 169393 67656290 ~ 67656509 (+)
G1402256 NA other upstream 569399 66914365 ~ 66914716 (+)
G1402066 NA other upstream 940430 66543311 ~ 66543685 (+)
G1401782 NA other upstream 1459870 66019001 ~ 66024245 (+)
G1401354 NA other upstream 1587052 65895891 ~ 65897063 (+)
G1403412 LOC106566473 other downstream 166171 67653068 ~ 67653447 (+)
G1403463 NA other downstream 252065 67738962 ~ 67739702 (+)
G1403655 LOC106566486 other downstream 286659 67773293 ~ 67777491 (+)
G1404105 NA other downstream 802618 68289515 ~ 68290086 (+)

Expression


Co-expression Network