G1403412 (LOC106566473)


Basic Information

Item Value
gene id G1403412
gene name LOC106566473
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67653068 ~ 67653447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602718
GGCTCCGAGGAGGACAGGCTGTTCTGGCTGATGATGCTCTTCTCCAGAGTGTCCACCTTCTCATAGGTCCGTTTCTGACGCACCATGCCCTCCGACGCCAGGGGCGAGAGGGGCACGTCGCCATGGGTACTCCCGCTCCCGGTCCGGTACAGAGAGTGGTTACTGGCGCTGATGTCCTCTCGGGAGGCGCTGCGGCCCCTGTACTTCTTCGGGGAACCCAGGGGGGAACGGGTCCGAGGTACAGAGCTGTCAGACATCTCAGTGTCCAGGCTGGCCTTGCTGCCACGCAGGGTGTTAGAGCGACTCACCACCACCCGCATCTCTGCCATCAGCTTCTCATTCAGGGCACTGAGCTCCCCACTGCTGCCCACTGAGCCTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602718 True 380 TUCP 0.63 1 67653068 67653447

Neighbor

gene id symbol gene type direction distance location
LOC110492593 LOC105017353 coding upstream 179375 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 250758 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 377327 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 401441 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 505705 67133110 ~ 67147363 (+)
LOC110492619 LOC106566466 coding downstream 622048 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 647581 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 695326 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 743315 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 768666 68422113 ~ 68431744 (+)
G1403408 NA non-coding upstream 3913 67648714 ~ 67649155 (+)
G1403394 NA non-coding upstream 40238 67608842 ~ 67612830 (+)
G1403378 NA non-coding upstream 80145 67572344 ~ 67572923 (+)
G1403379 NA non-coding upstream 80956 67571454 ~ 67572112 (+)
G1403328 NA non-coding upstream 124576 67481670 ~ 67528492 (+)
G1403414 NA non-coding downstream 2843 67656290 ~ 67656509 (+)
G1403418 NA non-coding downstream 8694 67662141 ~ 67662523 (+)
G1403420 NA non-coding downstream 10104 67663551 ~ 67663766 (+)
G1403421 NA non-coding downstream 11291 67664738 ~ 67665011 (+)
G1403422 NA non-coding downstream 12239 67665686 ~ 67665920 (+)
G1402256 NA other upstream 738352 66914365 ~ 66914716 (+)
G1402066 NA other upstream 1109383 66543311 ~ 66543685 (+)
G1401782 NA other upstream 1628823 66019001 ~ 66024245 (+)
G1401354 NA other upstream 1756005 65895891 ~ 65897063 (+)
G1403463 NA other downstream 85515 67738962 ~ 67739702 (+)
G1403655 LOC106566486 other downstream 120109 67773293 ~ 67777491 (+)
G1404105 NA other downstream 636068 68289515 ~ 68290086 (+)
G1404281 LOC106566460 other downstream 1027999 68681446 ~ 68681977 (+)

Expression


Co-expression Network