G1403438


Basic Information

Item Value
gene id G1403438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67690573 ~ 67690846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602744
tggttagcgcacactgcgcccggcccgccacaggagtcgctggtgcgcgatgagacaacgacacccctaccgaccaagccctccctaacccgggcgacgctaggccaattgcgtcgccccacggacctcccggtcgcggccggttacgacagagcctgggcgcgaactcagggactctgatggcacagctggcgctgcagtacagcgcccttaaccactgcgccacccgggaggccctgagcaggcctttctaatcgacctggcccgggtatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602744 True 274 lncRNA 0.68 1 67690573 67690846

Neighbor

gene id symbol gene type direction distance location
LOC110492593 LOC105017353 coding upstream 216880 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 288263 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 414832 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 438946 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 543210 67133110 ~ 67147363 (+)
LOC110492619 LOC106566466 coding downstream 584649 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 610182 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 657927 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 705916 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 731267 68422113 ~ 68431744 (+)
G1403435 NA non-coding upstream 4114 67686196 ~ 67686459 (+)
G1403431 NA non-coding upstream 9669 67680678 ~ 67680904 (+)
G1403426 NA non-coding upstream 20100 67670253 ~ 67670473 (+)
G1403425 NA non-coding upstream 21283 67668931 ~ 67669290 (+)
G1403422 NA non-coding upstream 24653 67665686 ~ 67665920 (+)
G1403439 NA non-coding downstream 420 67691266 ~ 67691470 (+)
G1403443 NA non-coding downstream 6994 67697840 ~ 67698056 (+)
G1403444 NA non-coding downstream 7686 67698532 ~ 67698829 (+)
G1403445 LOC106566473 non-coding downstream 8380 67699226 ~ 67699591 (+)
G1403447 NA non-coding downstream 13930 67704776 ~ 67706284 (+)
G1403412 LOC106566473 other upstream 37126 67653068 ~ 67653447 (+)
G1402256 NA other upstream 775857 66914365 ~ 66914716 (+)
G1402066 NA other upstream 1146888 66543311 ~ 66543685 (+)
G1401782 NA other upstream 1666328 66019001 ~ 66024245 (+)
G1403463 NA other downstream 48116 67738962 ~ 67739702 (+)
G1403655 LOC106566486 other downstream 82710 67773293 ~ 67777491 (+)
G1404105 NA other downstream 598669 68289515 ~ 68290086 (+)
G1404281 LOC106566460 other downstream 990600 68681446 ~ 68681977 (+)

Expression


Co-expression Network