G1403443


Basic Information

Item Value
gene id G1403443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67697840 ~ 67698056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1602749
CAAAATACTGAGGACATCATCCATCTCCCTGACCATCCGTCCTTCTCTGTCCTGGTTTATCTCAaacttcttctctctgtcctggTTTATCTCaaacttcttctctctgtcttggttaatCTCAAACTTCTTCTCTCTGTTTTGGTTAATCTCaaacttcttctctctgtcttggttaatCTCaaacttcttctctctgtcttggttaatCTCaaac

Function

NR:

description
S100u protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1602749 True 217 lncRNA 0.40 1 67697840 67698056

Neighbor

gene id symbol gene type direction distance location
LOC110492593 LOC105017353 coding upstream 224147 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 295530 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 422099 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 446213 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 550477 67133110 ~ 67147363 (+)
LOC110492619 LOC106566466 coding downstream 577439 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 602972 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 650717 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 698706 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 724057 68422113 ~ 68431744 (+)
G1403439 NA non-coding upstream 6370 67691266 ~ 67691470 (+)
G1403438 NA non-coding upstream 6994 67690573 ~ 67690846 (+)
G1403435 NA non-coding upstream 11381 67686196 ~ 67686459 (+)
G1403431 NA non-coding upstream 16936 67680678 ~ 67680904 (+)
G1403426 NA non-coding upstream 27367 67670253 ~ 67670473 (+)
G1403444 NA non-coding downstream 476 67698532 ~ 67698829 (+)
G1403445 LOC106566473 non-coding downstream 1170 67699226 ~ 67699591 (+)
G1403447 NA non-coding downstream 6720 67704776 ~ 67706284 (+)
G1403460 NA non-coding downstream 35275 67733331 ~ 67733625 (+)
G1403461 NA non-coding downstream 36504 67734560 ~ 67734899 (+)
G1403412 LOC106566473 other upstream 44393 67653068 ~ 67653447 (+)
G1402256 NA other upstream 783124 66914365 ~ 66914716 (+)
G1402066 NA other upstream 1154155 66543311 ~ 66543685 (+)
G1401782 NA other upstream 1673595 66019001 ~ 66024245 (+)
G1403463 NA other downstream 40906 67738962 ~ 67739702 (+)
G1403655 LOC106566486 other downstream 75500 67773293 ~ 67777491 (+)
G1404105 NA other downstream 591459 68289515 ~ 68290086 (+)
G1404281 LOC106566460 other downstream 983390 68681446 ~ 68681977 (+)

Expression


Co-expression Network