Gene
RNA
| Item | Value |
|---|---|
| gene id | G1403622 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 67714108 ~ 67720493 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1602944 | False | 402 | lncRNA | 0.39 | 3 | 67714108 | 67720493 |
| TU1602948 | False | 283 | lncRNA | 0.40 | 2 | 67715811 | 67720493 |
| TU1602946 | True | 251 | lncRNA | 0.39 | 2 | 67719605 | 67720493 |
67,707,000
67,708,000
67,709,000
67,710,000
67,711,000
67,712,000
67,713,000
67,714,000
67,715,000
67,715,000
67,716,000
67,717,000
67,718,000
67,719,000
67,720,000
67,721,000
67,722,000
67,723,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939572 | NA | coding | downstream | 109142 | 67573165 ~ 67604966 (-) |
| LOC110492595 | LOC106566479 | coding | downstream | 143021 | 67512498 ~ 67571087 (-) |
| LOC110492594 | LOC106566480 | coding | downstream | 203964 | 67499665 ~ 67510144 (-) |
| LOC110492592 | LOC106566478 | coding | downstream | 221457 | 67471944 ~ 67492651 (-) |
| LOC110492588 | LOC106566492 | coding | downstream | 681063 | 67021935 ~ 67033045 (-) |
| LOC110491155 | LOC106572085 | coding | upstream | 52777 | 67773270 ~ 68040541 (-) |
| LOC118939464 | NA | coding | upstream | 440314 | 68160807 ~ 68163967 (-) |
| LOC110492614 | LOC106566471 | coding | upstream | 449533 | 68170026 ~ 68176211 (-) |
| id1 | id1 | coding | upstream | 462732 | 68183225 ~ 68184419 (-) |
| LOC110492616 | LOC106566469 | coding | upstream | 528552 | 68249045 ~ 68265361 (-) |
| G1403621 | NA | non-coding | downstream | 12674 | 67701160 ~ 67701434 (-) |
| G1403616 | NA | non-coding | downstream | 23300 | 67690567 ~ 67690808 (-) |
| G1403615 | NA | non-coding | downstream | 23769 | 67690041 ~ 67690339 (-) |
| G1403614 | NA | non-coding | downstream | 24370 | 67689538 ~ 67689738 (-) |
| G1403605 | NA | non-coding | downstream | 35005 | 67678871 ~ 67679103 (-) |
| G1403628 | NA | non-coding | upstream | 7668 | 67728161 ~ 67728480 (-) |
| G1403632 | NA | non-coding | upstream | 10582 | 67731075 ~ 67731289 (-) |
| G1403634 | NA | non-coding | upstream | 12340 | 67732833 ~ 67733145 (-) |
| G1403637 | NA | non-coding | upstream | 16821 | 67737314 ~ 67737548 (-) |
| G1403640 | NA | non-coding | upstream | 18606 | 67739099 ~ 67739465 (-) |
| G1403498 | NA | other | downstream | 269929 | 67443421 ~ 67444179 (-) |
| G1402707 | LOC106566505 | other | downstream | 1219441 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 1287786 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 1959498 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 2077736 | 65635482 ~ 65636372 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 1070696 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 1482793 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 1557334 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 1797262 | 69517755 ~ 69518113 (-) |
| G1405917 | NA | other | upstream | 2358164 | 70078657 ~ 70095541 (-) |
