XLOC_033025 (CU467856.1)


Basic Information

Item Value
gene id XLOC_033025
gene name CU467856.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39524924 ~ 39525505 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064176
GCACAAGCGAGCGAATGAGCTTTTGAAACGGGCATTCAGGGAAATAGTGCTTTCCAGGATGGAGAGGATGTTCATTTATAAATACTCACGTTCATGTTTGCAATGATTTTagttgtttaaataaatgaatttatttgtcattttcatCAGAGTAAACCAAGTCTTAATATGGGctataaaaagaaacaaaacagaaaataagTTGAATTGCCAGCAAAGTGTTGGATCAAAGTCAATGTTTCACACACTATGCAACCAGCTGCAGTTAAATTTCAAAACACACATCTGGAATATACGCCTACAAAAGAAACAATCATTTGCTTGCAGATTATGGAATAAAATGGGAACATGCAAAGGTAACCTGACTTCTAGATAATGCAGAGTACTCCTAAAAATTCTCTCAGAATAATAAGAATgtgatgtttcacattttttgtcATTCGTGGAtataaataatcatgattatgcaAGCAAGCATTTCCCTGCTGGTTCACATCTCTTTGTTTTGTACATTGATTACTGTAACTGTTTTATACTCCGatgaaaaacatgaaaaaataataaaaggcttttattttgcaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103358

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064176 True 582 TEC 0.33 1 39524924 39525505

Neighbor

gene id symbol gene type direction distance location
XLOC_033024 NA coding downstream 3092 39491846 ~ 39521832 (-)
XLOC_033023 scn8ab coding downstream 35734 39392442 ~ 39489190 (-)
XLOC_033022 zgc:158846 coding downstream 180665 39336731 ~ 39344259 (-)
XLOC_033021 krt4 coding downstream 211897 39308498 ~ 39313027 (-)
XLOC_033020 arhgef25b coding downstream 249009 39256170 ~ 39275915 (-)
XLOC_033026 dip2bb coding upstream 5630 39531135 ~ 39605734 (-)
XLOC_033027 atf7b coding upstream 87852 39613357 ~ 39631181 (-)
XLOC_033028 larp4ab coding upstream 107560 39633065 ~ 39653972 (-)
XLOC_033029 pfdn5 coding upstream 136083 39661588 ~ 39666722 (-)
XLOC_033030 espl1 coding upstream 143345 39668850 ~ 39700965 (-)
XLOC_033009 NA non-coding downstream 760598 38759546 ~ 38764326 (-)
XLOC_033008 CR628341.2 non-coding downstream 927140 38597669 ~ 38597784 (-)
XLOC_033006 CR407584.1 non-coding downstream 1166844 38132511 ~ 38358080 (-)
XLOC_033003 BX322552.1 non-coding downstream 1909441 37615366 ~ 37615483 (-)
XLOC_033038 NA non-coding upstream 513187 40038692 ~ 40044111 (-)
XLOC_033043 NA non-coding upstream 647723 40173228 ~ 40182520 (-)
XLOC_033046 NA non-coding upstream 857919 40383424 ~ 40409125 (-)
XLOC_033052 NA non-coding upstream 951925 40477430 ~ 40482198 (-)
XLOC_033055 CU855953.1 non-coding upstream 1099799 40625304 ~ 40625420 (-)

Expression


Co-expression Network