Gene
RNA
| Item | Value |
|---|---|
| gene id | G1403815 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 67784320 ~ 67785684 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1603168 | False | 401 | lncRNA | 0.55 | 2 | 67784320 | 67785684 |
| TU1603169 | True | 268 | lncRNA | 0.54 | 2 | 67784320 | 67784767 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491154 | LOC106566473 | coding | downstream | 11740 | 67608824 ~ 67772580 (-) |
| LOC118939572 | NA | coding | downstream | 179354 | 67573165 ~ 67604966 (-) |
| LOC110492595 | LOC106566479 | coding | downstream | 213233 | 67512498 ~ 67571087 (-) |
| LOC110492594 | LOC106566480 | coding | downstream | 274176 | 67499665 ~ 67510144 (-) |
| LOC110492592 | LOC106566478 | coding | downstream | 291669 | 67471944 ~ 67492651 (-) |
| LOC118939464 | NA | coding | upstream | 375123 | 68160807 ~ 68163967 (-) |
| LOC110492614 | LOC106566471 | coding | upstream | 384342 | 68170026 ~ 68176211 (-) |
| id1 | id1 | coding | upstream | 397541 | 68183225 ~ 68184419 (-) |
| LOC110492616 | LOC106566469 | coding | upstream | 463361 | 68249045 ~ 68265361 (-) |
| LOC110492615 | LOC106566468 | coding | upstream | 479753 | 68265437 ~ 68272147 (-) |
| LOC110491155 | LOC106572085 | non-coding | downstream | 8859 | 67773270 ~ 68040541 (-) |
| G1403649 | NA | non-coding | downstream | 33794 | 67750306 ~ 67750526 (-) |
| G1403642 | NA | non-coding | downstream | 43383 | 67740565 ~ 67740937 (-) |
| G1403640 | NA | non-coding | downstream | 44855 | 67739099 ~ 67739465 (-) |
| G1403637 | NA | non-coding | downstream | 46772 | 67737314 ~ 67737548 (-) |
| G1403863 | NA | non-coding | upstream | 107319 | 67893003 ~ 67894154 (-) |
| G1403872 | NA | non-coding | upstream | 126995 | 67912679 ~ 67913023 (-) |
| G1403873 | NA | non-coding | upstream | 127568 | 67913252 ~ 67914541 (-) |
| G1403948 | NA | non-coding | upstream | 258603 | 68044287 ~ 68045398 (-) |
| G1403966 | NA | non-coding | upstream | 292971 | 68078655 ~ 68146780 (-) |
| G1403498 | NA | other | downstream | 340141 | 67443421 ~ 67444179 (-) |
| G1402707 | LOC106566505 | other | downstream | 1289653 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 1357998 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 2029710 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 2147948 | 65635482 ~ 65636372 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 1005505 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 1417602 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 1492143 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 1732071 | 69517755 ~ 69518113 (-) |
| G1405917 | NA | other | upstream | 2292973 | 70078657 ~ 70095541 (-) |
