G1403692


Basic Information

Item Value
gene id G1403692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67866297 ~ 67868121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1603030
taatcatgtcatgtcatattgatcaatttaaatcagtctgcagtaatcctgttatgttgtattgatcaatataaatcagtctgcagtaatcctgttatgtcatattgatcaatataaatcagtctgcagtaatcctgtcatgtcatattgatcaatttaaatcagtctgcagtaatcatgtcatgtcatattgatcaatttaaatcagtctgcagtaatcctgttatgttgtattgatcaatataaatcagtctgcagtaatcctgttatgtcatattgatcaatataaatcagtctgcagtaatcctgtcatgtcatattgatcaatataaatcagtctgcagtaatcctgtcatgtcatattgatcaatataaatcagtctgcagtaatcctgtcatgtcatattgatcaatataaatcagtctgcagtaatcctgttatgtcatatggatcaatataaatcagtctgcagtaatcctgtcatgtcatattgatcaatttaaatcagtctgcagtaatcctgttatgtcatatggatcaatataaatcagtctgcagtaatcctgttatgtcatatggatcaatataaatcagtctgcagtaatcctgttatgtcatatggatcaatataaatcagtctgcagtaatcctgttatgtcatatggatcaatataaatcagtctgcagtaatcctacagtatgtcatatggatcaatataaatcagtctgcagtaatcctacAGTATGCCATatggatcaatataaatcagtctgcagtaatcctacagtatgtcatatggatcaatataaatcagtctgcagtaatcctacagtatgtcatatggatcaatataaatcagtctgcagtaatcctacagtatgtcatatggatcaatataaatcagtctgcagtaatcctacAGTATGTCATACTGAAACAGTATTTTTCTTTTATGATACTGACACAGTGAAGAGCTTTTTTGGGCCTGTATCTGTGTAAAAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106569691

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1603030 True 1004 lncRNA 0.32 2 67866297 67868121

Neighbor

gene id symbol gene type direction distance location
LOC110492593 LOC105017353 coding upstream 392604 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 463987 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 590556 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 614670 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 718934 67133110 ~ 67147363 (+)
LOC110492619 LOC106566466 coding downstream 407374 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 432907 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 480652 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 528641 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 553992 68422113 ~ 68431744 (+)
G1403669 NA non-coding upstream 52560 67812816 ~ 67813737 (+)
G1403655 LOC106566486 non-coding upstream 91389 67773293 ~ 67777491 (+)
G1403472 NA non-coding upstream 93868 67771794 ~ 67772429 (+)
G1403471 NA non-coding upstream 95125 67770913 ~ 67771172 (+)
G1403461 NA non-coding upstream 131398 67734560 ~ 67734899 (+)
G1403716 NA non-coding downstream 43589 67911710 ~ 67911910 (+)
G1403720 NA non-coding downstream 50049 67918170 ~ 67918456 (+)
G1403749 NA non-coding downstream 112502 67980623 ~ 67981028 (+)
G1403761 NA non-coding downstream 138902 68007023 ~ 68064187 (+)
G1403777 NA non-coding downstream 178171 68046292 ~ 68047295 (+)
G1403463 NA other upstream 126595 67738962 ~ 67739702 (+)
G1403412 LOC106566473 other upstream 212850 67653068 ~ 67653447 (+)
G1402256 NA other upstream 951581 66914365 ~ 66914716 (+)
G1404105 NA other downstream 421394 68289515 ~ 68290086 (+)
G1404281 LOC106566460 other downstream 813325 68681446 ~ 68681977 (+)
G1404700 NA other downstream 1241593 69109714 ~ 69113350 (+)
G1404785 NA other downstream 1377424 69245545 ~ 69253709 (+)

Expression


Co-expression Network