G1403720


Basic Information

Item Value
gene id G1403720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 67918170 ~ 67918456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1603064
tctaccagagatttgagactgggacagaggttcaccttccagcaggacaatgacgcaacacttgagtggttgaaggggaaacatttaaatatcttggaatggcctagtcgaagcccagacctcaatccaattgagaatctgtggtatgacttaaagattgctgtacatcagtggaacccatccaacatgaaggagctggagctggagcagttttgccttgaagaatgggcaaaaatcccagtggctagatgtgccaagcttataacataataacacataatataTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1603064 True 287 lncRNA 0.44 1 67918170 67918456

Neighbor

gene id symbol gene type direction distance location
LOC110492593 LOC105017353 coding upstream 444477 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 515860 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 642429 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 666543 67171830 ~ 67251627 (+)
LOC118939477 NA coding upstream 770807 67133110 ~ 67147363 (+)
LOC110492619 LOC106566466 coding downstream 357039 68275495 ~ 68279289 (+)
LOC110492620 NA coding downstream 382572 68301028 ~ 68345013 (+)
LOC110491164 LOC106566465 coding downstream 430317 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 478306 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 503657 68422113 ~ 68431744 (+)
G1403716 NA non-coding upstream 6260 67911710 ~ 67911910 (+)
G1403692 NA non-coding upstream 50049 67866297 ~ 67868121 (+)
G1403669 NA non-coding upstream 104433 67812816 ~ 67813737 (+)
G1403655 LOC106566486 non-coding upstream 143262 67773293 ~ 67777491 (+)
G1403472 NA non-coding upstream 145741 67771794 ~ 67772429 (+)
G1403749 NA non-coding downstream 62167 67980623 ~ 67981028 (+)
G1403761 NA non-coding downstream 88567 68007023 ~ 68064187 (+)
G1403777 NA non-coding downstream 127836 68046292 ~ 68047295 (+)
G1403792 NA non-coding downstream 174892 68093348 ~ 68093912 (+)
G1403809 NA non-coding downstream 228015 68146471 ~ 68146753 (+)
G1403463 NA other upstream 178468 67738962 ~ 67739702 (+)
G1403412 LOC106566473 other upstream 264723 67653068 ~ 67653447 (+)
G1402256 NA other upstream 1003454 66914365 ~ 66914716 (+)
G1404105 NA other downstream 371059 68289515 ~ 68290086 (+)
G1404281 LOC106566460 other downstream 762990 68681446 ~ 68681977 (+)
G1404700 NA other downstream 1191258 69109714 ~ 69113350 (+)
G1404785 NA other downstream 1327089 69245545 ~ 69253709 (+)

Expression


Co-expression Network