G1404096


Basic Information

Item Value
gene id G1404096
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68325676 ~ 68326098 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1603500
gttgtattcagcagtacactaaggtctactacacctgttgtattcagcagtacactacggtctactacacctgttgtattcagcagtacactaaggtctactacacctgttgtattcagcagtacactacggtctactacacctgttgtattcagcagtacactacggtctcctacacctgttttattcagcagtacactaaggtctactacacctgttgtattcagcagtacactacggtctactacacctgttgtattcagcagtacactatAAGGtctcctacacctgttgtattcagcagtacactaaggtctactacacctgttttattcagcagtacactacggt

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1603500 True 351 lncRNA 0.43 2 68325676 68326098

Neighbor

gene id symbol gene type direction distance location
LOC110492619 LOC106566466 coding upstream 46387 68275495 ~ 68279289 (+)
LOC110492593 LOC105017353 coding upstream 851983 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 923366 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 1049935 67260049 ~ 67275741 (+)
LOC110492589 kcnd1 coding upstream 1074049 67171830 ~ 67251627 (+)
LOC110491164 LOC106566465 coding downstream 22675 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 70664 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 96015 68422113 ~ 68431744 (+)
LOC110492628 LOC106566456 coding downstream 578712 68904810 ~ 68909231 (+)
LOC110492629 LOC106566457 coding downstream 586789 68912887 ~ 68915383 (+)
G1404106 NA non-coding upstream 35217 68290151 ~ 68290459 (+)
G1404105 NA non-coding upstream 35590 68289515 ~ 68290086 (+)
G1404098 LOC106566485 non-coding upstream 41080 68281769 ~ 68284596 (+)
G1404078 NA non-coding upstream 59113 68265440 ~ 68266563 (+)
G1404063 NA non-coding upstream 106026 68219416 ~ 68219650 (+)
G1404093 NA non-coding downstream 19186 68345284 ~ 68345607 (+)
G1404153 ptn7 non-coding downstream 45482 68371580 ~ 68373836 (+)
G1404166 NA non-coding downstream 79657 68405755 ~ 68406645 (+)
G1404169 NA non-coding downstream 106015 68432113 ~ 68433787 (+)
G1404168 NA non-coding downstream 108414 68434512 ~ 68443855 (+)
G1403655 LOC106566486 other upstream 548185 67773293 ~ 67777491 (+)
G1403463 NA other upstream 585974 67738962 ~ 67739702 (+)
G1403412 LOC106566473 other upstream 672229 67653068 ~ 67653447 (+)
G1404281 LOC106566460 other downstream 355348 68681446 ~ 68681977 (+)
G1404700 NA other downstream 783616 69109714 ~ 69113350 (+)
G1404785 NA other downstream 919447 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 979598 69305670 ~ 69312263 (+)
G1404827 NA other downstream 1038423 69364521 ~ 69369376 (+)

Expression


Co-expression Network