G1404367



Basic Information


Item Value
gene id G1404367
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68325731 ~ 68326012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1603836
tgctgaatacaacaggtgtagtagaccgtagtgtactgctgaatacaacaggtgtagtagaccttagtgtactgctgaataaaacaggtgtaggagaccgtagtgtactgctgaatacaacaggtgtagtagaccgtagtgtactgctgaatacaacaggtgtagtagaccttagtgtactgctgaatacaacaggtgtagtagaccgta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1603836 True 210 lncRNA 0.43 2 68325731 68326012

Neighbor


gene id symbol gene type direction distance location
LOC110492615 LOC106566468 coding downstream 53584 68265437 ~ 68272147 (-)
LOC110492616 LOC106566469 coding downstream 60370 68249045 ~ 68265361 (-)
id1 id1 coding downstream 141312 68183225 ~ 68184419 (-)
LOC110492614 LOC106566471 coding downstream 149520 68170026 ~ 68176211 (-)
LOC118939464 NA coding downstream 161764 68160807 ~ 68163967 (-)
LOC110492621 LOC106566464 coding upstream 37162 68363174 ~ 68367397 (-)
LOC110491166 NA coding upstream 43983 68369995 ~ 68383908 (-)
LOC110491167 LOC106566462 coding upstream 118271 68444283 ~ 68620213 (-)
LOC118939573 NA coding upstream 339121 68665133 ~ 68670586 (-)
LOC110492627 LOC106566460 coding upstream 345403 68671413 ~ 68703603 (-)
G1404061 NA non-coding downstream 109483 68216018 ~ 68216248 (-)
G1404059 NA non-coding downstream 111625 68213291 ~ 68214106 (-)
G1404035 NA non-coding downstream 135469 68190025 ~ 68190262 (-)
G1404031 NA non-coding downstream 140091 68185359 ~ 68185640 (-)
G1404017 NA non-coding downstream 171264 68154260 ~ 68154467 (-)
G1404368 NA non-coding upstream 1634 68327646 ~ 68327903 (-)
G1404373 NA non-coding upstream 8529 68334541 ~ 68334953 (-)
G1404385 NA non-coding upstream 33361 68359373 ~ 68359652 (-)
G1404321 NA non-coding upstream 42971 68368983 ~ 68369804 (-)
G1404399 NA non-coding upstream 72107 68398119 ~ 68398401 (-)
G1403498 NA other downstream 881552 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 1831064 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 1899409 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 2571121 65715711 ~ 65754610 (-)
G1401617 NA other downstream 2689359 65635482 ~ 65636372 (-)
LOC118939478 LOC106566484 other upstream 465177 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 877274 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 951815 69277827 ~ 69280359 (-)
G1405172 NA other upstream 1191743 69517755 ~ 69518113 (-)
G1405917 NA other upstream 1752645 70078657 ~ 70095541 (-)

Expression



Co-expression Network