G1404093


Basic Information

Item Value
gene id G1404093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68345284 ~ 68345607 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1603497
tccaacaggtcccagacgtgctcaataggattgagatttgggctcttcgctggccatggcagaacactgatattcctgtcttgcaggaaatcacgtacagaacgagcagtatggctggtgacattgtcatgctggagggtcatgtcaggatgagcctgcaggaagggtaacaCATGCTCCTTttcaccccattatttctatctctaccttgcacattcttccactgcaaatctacaattcaaatgttttacttgctatattgtaatattatattgtatttacttcgccaccatggccttttttttgcctttaccttccttatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1603497 True 324 lncRNA 0.43 1 68345284 68345607

Neighbor

gene id symbol gene type direction distance location
LOC110492620 NA coding upstream 271 68301028 ~ 68345013 (+)
LOC110492619 LOC106566466 coding upstream 65995 68275495 ~ 68279289 (+)
LOC110492593 LOC105017353 coding upstream 871591 67459278 ~ 67476876 (+)
pim1 LOC106566482 coding upstream 942974 67398861 ~ 67402310 (+)
LOC110492590 LOC106566489 coding upstream 1069543 67260049 ~ 67275741 (+)
LOC110491164 LOC106566465 coding downstream 3166 68348773 ~ 68357169 (+)
LOC110492622 LOC100380652 coding downstream 51155 68396762 ~ 68405191 (+)
LOC110492623 LOC106566463 coding downstream 76506 68422113 ~ 68431744 (+)
LOC110492628 LOC106566456 coding downstream 559203 68904810 ~ 68909231 (+)
LOC110492629 LOC106566457 coding downstream 567280 68912887 ~ 68915383 (+)
G1404096 NA non-coding upstream 19186 68325676 ~ 68326098 (+)
G1404106 NA non-coding upstream 54825 68290151 ~ 68290459 (+)
G1404105 NA non-coding upstream 55198 68289515 ~ 68290086 (+)
G1404098 LOC106566485 non-coding upstream 60688 68281769 ~ 68284596 (+)
G1404078 NA non-coding upstream 78721 68265440 ~ 68266563 (+)
G1404153 ptn7 non-coding downstream 25973 68371580 ~ 68373836 (+)
G1404166 NA non-coding downstream 60148 68405755 ~ 68406645 (+)
G1404169 NA non-coding downstream 86506 68432113 ~ 68433787 (+)
G1404168 NA non-coding downstream 88905 68434512 ~ 68443855 (+)
G1404179 NA non-coding downstream 98772 68444379 ~ 68446531 (+)
G1403655 LOC106566486 other upstream 567793 67773293 ~ 67777491 (+)
G1403463 NA other upstream 605582 67738962 ~ 67739702 (+)
G1403412 LOC106566473 other upstream 691837 67653068 ~ 67653447 (+)
G1404281 LOC106566460 other downstream 335839 68681446 ~ 68681977 (+)
G1404700 NA other downstream 764107 69109714 ~ 69113350 (+)
G1404785 NA other downstream 899938 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 960089 69305670 ~ 69312263 (+)
G1404827 NA other downstream 1018914 69364521 ~ 69369376 (+)

Expression


Co-expression Network