G1404232


Basic Information

Item Value
gene id G1404232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68538131 ~ 68538339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1603649
ccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagccgggttcctctctaggtttcttcctaggttttggcctttctagtgagtttttcctagccactgtgcttctacacctgcattgcttgctgtttggggtttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1603649 True 209 lncRNA 0.50 1 68538131 68538339

Neighbor

gene id symbol gene type direction distance location
LOC110492623 LOC106566463 coding upstream 106387 68422113 ~ 68431744 (+)
LOC110492622 LOC100380652 coding upstream 132940 68396762 ~ 68405191 (+)
LOC110491164 LOC106566465 coding upstream 180962 68348773 ~ 68357169 (+)
LOC110492620 NA coding upstream 193118 68301028 ~ 68345013 (+)
LOC110492619 LOC106566466 coding upstream 258842 68275495 ~ 68279289 (+)
LOC110492628 LOC106566456 coding downstream 366471 68904810 ~ 68909231 (+)
LOC110492629 LOC106566457 coding downstream 374548 68912887 ~ 68915383 (+)
LOC118939574 NA coding downstream 393794 68932133 ~ 68934318 (+)
LOC110492631 LOC106566454 coding downstream 419226 68957565 ~ 68961010 (+)
LOC110492632 LOC106566452 coding downstream 423408 68961747 ~ 68970217 (+)
G1404179 NA non-coding upstream 91600 68444379 ~ 68446531 (+)
G1404168 NA non-coding upstream 94276 68434512 ~ 68443855 (+)
G1404169 NA non-coding upstream 104344 68432113 ~ 68433787 (+)
G1404166 NA non-coding upstream 131486 68405755 ~ 68406645 (+)
G1404153 ptn7 non-coding upstream 164295 68371580 ~ 68373836 (+)
G1404233 NA non-coding downstream 602 68538941 ~ 68539150 (+)
G1404234 NA non-coding downstream 1138 68539477 ~ 68539757 (+)
G1404256 LOC106566462 non-coding downstream 81224 68619563 ~ 68621847 (+)
G1404259 NA non-coding downstream 91110 68629449 ~ 68629652 (+)
G1404273 NA non-coding downstream 120014 68658353 ~ 68672602 (+)
G1404105 NA other upstream 248045 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 760640 67773293 ~ 67777491 (+)
G1403463 NA other upstream 798429 67738962 ~ 67739702 (+)
G1403412 LOC106566473 other upstream 884684 67653068 ~ 67653447 (+)
G1404281 LOC106566460 other downstream 143107 68681446 ~ 68681977 (+)
G1404700 NA other downstream 571375 69109714 ~ 69113350 (+)
G1404785 NA other downstream 707206 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 767357 69305670 ~ 69312263 (+)
G1404827 NA other downstream 826182 69364521 ~ 69369376 (+)

Expression


Co-expression Network