G1404493



Basic Information


Item Value
gene id G1404493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68578897 ~ 68579180 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1603976
gtgacacactccagccacatgaggtctagcattgtcttgcattaggaggaacccagggccaaccgcaccagcatatggtctcacaaggggtctgaggatctcatctcggtacctaatggcagccaggctacctctggcgagcacatggagggctgtgcggccccccaaagaaatgccaccccacaccatgactgacccaccgccaaaccggtcatgctggagtatgttgcaggcagcagaacgttcttcacggcgtctccagactgtcacgtctgtcacatgtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1603976 True 284 lncRNA 0.57 1 68578897 68579180

Neighbor


gene id symbol gene type direction distance location
LOC110491166 NA coding downstream 194989 68369995 ~ 68383908 (-)
LOC110492621 LOC106566464 coding downstream 211500 68363174 ~ 68367397 (-)
LOC110492618 LOC106566485 coding downstream 241961 68279354 ~ 68336936 (-)
LOC110492615 LOC106566468 coding downstream 306750 68265437 ~ 68272147 (-)
LOC110492616 LOC106566469 coding downstream 313536 68249045 ~ 68265361 (-)
LOC118939573 NA coding upstream 85953 68665133 ~ 68670586 (-)
LOC110492627 LOC106566460 coding upstream 92235 68671413 ~ 68703603 (-)
LOC110492626 LOC106566459 coding upstream 124740 68703920 ~ 68772253 (-)
LOC118939478 LOC106566484 coding upstream 212133 68791189 ~ 68795025 (-)
LOC110491168 LOC106566483 coding upstream 315801 68894981 ~ 68896120 (-)
G1404492 NA non-coding downstream 500 68578063 ~ 68578397 (-)
G1404486 NA non-coding downstream 10124 68568563 ~ 68568773 (-)
G1404482 NA non-coding downstream 31471 68547136 ~ 68547426 (-)
G1404474 NA non-coding downstream 51380 68526876 ~ 68527517 (-)
LOC110491167 LOC106566462 non-coding downstream 134154 68444283 ~ 68620213 (-)
G1404498 NA non-coding upstream 9087 68588267 ~ 68588492 (-)
G1404525 NA non-coding upstream 49407 68628587 ~ 68628817 (-)
G1404526 NA non-coding upstream 49912 68629092 ~ 68629332 (-)
G1404527 NA non-coding upstream 50399 68629579 ~ 68629788 (-)
G1404529 NA non-coding upstream 53127 68632307 ~ 68632509 (-)
G1403498 NA other downstream 1134718 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2084230 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 2152575 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 2824287 65715711 ~ 65754610 (-)
G1401617 NA other downstream 2942525 65635482 ~ 65636372 (-)
G1404974 LOC106566438 other upstream 624106 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 698647 69277827 ~ 69280359 (-)
G1405172 NA other upstream 938575 69517755 ~ 69518113 (-)
G1405917 NA other upstream 1499477 70078657 ~ 70095541 (-)

Expression



Co-expression Network