Gene
RNA
| Item | Value |
|---|---|
| gene id | G1404543 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 68648270 ~ 68652339 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1604035 | True | 242 | lncRNA | 0.47 | 2 | 68648270 | 68652339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491167 | LOC106566462 | coding | downstream | 28057 | 68444283 ~ 68620213 (-) |
| LOC110491166 | NA | coding | downstream | 264362 | 68369995 ~ 68383908 (-) |
| LOC110492621 | LOC106566464 | coding | downstream | 280873 | 68363174 ~ 68367397 (-) |
| LOC110492618 | LOC106566485 | coding | downstream | 311334 | 68279354 ~ 68336936 (-) |
| LOC110492615 | LOC106566468 | coding | downstream | 376123 | 68265437 ~ 68272147 (-) |
| LOC118939573 | NA | coding | upstream | 12794 | 68665133 ~ 68670586 (-) |
| LOC110492627 | LOC106566460 | coding | upstream | 19076 | 68671413 ~ 68703603 (-) |
| LOC110492626 | LOC106566459 | coding | upstream | 51581 | 68703920 ~ 68772253 (-) |
| LOC118939478 | LOC106566484 | coding | upstream | 138974 | 68791189 ~ 68795025 (-) |
| LOC110491168 | LOC106566483 | coding | upstream | 242642 | 68894981 ~ 68896120 (-) |
| G1404530 | NA | non-coding | downstream | 15493 | 68632537 ~ 68632777 (-) |
| G1404529 | NA | non-coding | downstream | 15761 | 68632307 ~ 68632509 (-) |
| G1404527 | NA | non-coding | downstream | 18482 | 68629579 ~ 68629788 (-) |
| G1404526 | NA | non-coding | downstream | 18938 | 68629092 ~ 68629332 (-) |
| G1404525 | NA | non-coding | downstream | 19453 | 68628587 ~ 68628817 (-) |
| G1404588 | NA | non-coding | upstream | 136553 | 68788892 ~ 68789098 (-) |
| G1404608 | NA | non-coding | upstream | 233836 | 68886175 ~ 68886406 (-) |
| G1404624 | NA | non-coding | upstream | 248025 | 68900364 ~ 68901492 (-) |
| G1404634 | NA | non-coding | upstream | 252469 | 68904808 ~ 68907251 (-) |
| G1403498 | NA | other | downstream | 1204091 | 67443421 ~ 67444179 (-) |
| G1402707 | LOC106566505 | other | downstream | 2153603 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 2221948 | 66425551 ~ 66426322 (-) |
| LOC110492562 | LOC106568106 | other | downstream | 2893660 | 65715711 ~ 65754610 (-) |
| G1401617 | NA | other | downstream | 3011898 | 65635482 ~ 65636372 (-) |
| G1404974 | LOC106566438 | other | upstream | 550947 | 69203286 ~ 69207158 (-) |
| G1405016 | nsfl1c | other | upstream | 625488 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 865416 | 69517755 ~ 69518113 (-) |
| G1405917 | NA | other | upstream | 1426318 | 70078657 ~ 70095541 (-) |
