G1404609


Basic Information

Item Value
gene id G1404609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68887035 ~ 68890355 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604108
tgGAGTCTGTGGAGCAGGTTTCTATATAACCTCTAATGAACTGGAGTCTGTGGAGCAGGTTTCCATATAACCTCTAATGAACTGGAGTCTGTGGAGCAGGTTTCTATATAACCTCTAATGAACTGGAGTCTGTGGAGCAGGTTCCCATATAACCTCTAATGAACTGGAGTCTGTGGagcccactgtggacaaagtgaaatCAGCTGTGGAATACATCCACAGGAGCACAGTAGATGCTGAAAAACTAAAGTCTACACAACGCCAGatggggatgcctgagctgaggcctataaacaagactgcactacaaggtgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604108 True 316 lncRNA 0.46 3 68887035 68890355

Neighbor

gene id symbol gene type direction distance location
LOC110492623 LOC106566463 coding upstream 455291 68422113 ~ 68431744 (+)
LOC110492622 LOC100380652 coding upstream 481844 68396762 ~ 68405191 (+)
LOC110491164 LOC106566465 coding upstream 529866 68348773 ~ 68357169 (+)
LOC110492620 NA coding upstream 542022 68301028 ~ 68345013 (+)
LOC110492619 LOC106566466 coding upstream 607746 68275495 ~ 68279289 (+)
LOC110492628 LOC106566456 coding downstream 14455 68904810 ~ 68909231 (+)
LOC110492629 LOC106566457 coding downstream 22532 68912887 ~ 68915383 (+)
LOC118939574 NA coding downstream 41778 68932133 ~ 68934318 (+)
LOC110492631 LOC106566454 coding downstream 67210 68957565 ~ 68961010 (+)
LOC110492632 LOC106566452 coding downstream 71392 68961747 ~ 68970217 (+)
G1404283 LOC106566460 non-coding upstream 200150 68683019 ~ 68686885 (+)
G1404280 LOC106566460 non-coding upstream 206538 68680025 ~ 68680497 (+)
G1404271 LOC106566460 non-coding upstream 208064 68676022 ~ 68678971 (+)
G1404273 NA non-coding upstream 214433 68658353 ~ 68672602 (+)
G1404259 NA non-coding upstream 257383 68629449 ~ 68629652 (+)
G1404613 NA non-coding downstream 1040 68891395 ~ 68891650 (+)
G1404615 NA non-coding downstream 2703 68893058 ~ 68893827 (+)
G1404637 NA non-coding downstream 28695 68919050 ~ 68919289 (+)
G1404640 NA non-coding downstream 33108 68923463 ~ 68923913 (+)
G1404644 NA non-coding downstream 34649 68925004 ~ 68925243 (+)
G1404281 LOC106566460 other upstream 205058 68681446 ~ 68681977 (+)
G1404105 NA other upstream 596949 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1109544 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1147333 67738962 ~ 67739702 (+)
G1404700 NA other downstream 219359 69109714 ~ 69113350 (+)
G1404785 NA other downstream 355190 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 415341 69305670 ~ 69312263 (+)
G1404827 NA other downstream 474166 69364521 ~ 69369376 (+)
G1405216 NA other downstream 690374 69580729 ~ 69583626 (+)

Expression


Co-expression Network