G1404653


Basic Information

Item Value
gene id G1404653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68930578 ~ 68931336 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604167
TGGAAacggtatattgatgatatttttgttctatggaggggtgatgcaaaacagctccaggcgttccatgcttttcttaactcctgttctgagcatctgagatttactatgcaatctgacacacgtcaaatcagtttccttgatcttctgatcttgtgtgaagataatgttctatacactgatctttacaggaagcCTACTGATCctaacagtttgttgagggctgagAGCTGTCACCTGCTTCCCTTGAAAAAcagtttgccctacagccaattctgtcaAATCAAAAGAATGTAAAAAAACAATCAGATTTCGACAGAAATATGGCCGAGACGCAAAGAAAATTCAATTAGAGGAGGTACAAAAATGGTCAGATTAATACTGCCATTgaaaaaattcaaaacaaaaaaaaagaagcattcttgcgttctaactaccccgctattcaaagtgctctgaacaaattaagggaatcgttcacaaacattggcacattctaagatccgatgatagtctcggtaatgtgttttcggaccttcccttggtcgtattctcgcggggcagaaacCTCAGAGATCATTTGGTAAGCGCTGATTTACCAACCCAAAATATCCCTGCACAATGTgtatttgcgcccctactggacggaaactacaagtgtaatggctgtgctcaatgcagtggcacttataaatgtagatccttcaaactcccccaaacagggaaatcgatcccaatcaaaggtgttatgtGCTCCAc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604167 True 759 lncRNA 0.41 1 68930578 68931336

Neighbor

gene id symbol gene type direction distance location
LOC110492629 LOC106566457 coding upstream 15195 68912887 ~ 68915383 (+)
LOC110492628 LOC106566456 coding upstream 21347 68904810 ~ 68909231 (+)
LOC110492623 LOC106566463 coding upstream 498834 68422113 ~ 68431744 (+)
LOC110492622 LOC100380652 coding upstream 525387 68396762 ~ 68405191 (+)
LOC110491164 LOC106566465 coding upstream 573409 68348773 ~ 68357169 (+)
LOC118939574 NA coding downstream 797 68932133 ~ 68934318 (+)
LOC110492631 LOC106566454 coding downstream 26229 68957565 ~ 68961010 (+)
LOC110492632 LOC106566452 coding downstream 30411 68961747 ~ 68970217 (+)
LOC110492634 LOC106566451 coding downstream 42378 68973714 ~ 69006032 (+)
LOC110491169 arfgef2 coding downstream 78165 69009501 ~ 69056918 (+)
G1404644 NA non-coding upstream 5335 68925004 ~ 68925243 (+)
G1404640 NA non-coding upstream 6665 68923463 ~ 68923913 (+)
G1404637 NA non-coding upstream 11289 68919050 ~ 68919289 (+)
G1404615 NA non-coding upstream 36751 68893058 ~ 68893827 (+)
G1404613 NA non-coding upstream 38928 68891395 ~ 68891650 (+)
G1404662 NA non-coding downstream 6353 68937689 ~ 68937994 (+)
G1404663 NA non-coding downstream 6709 68938045 ~ 68938283 (+)
G1404674 NA non-coding downstream 15797 68947133 ~ 68947365 (+)
G1404685 NA non-coding downstream 20803 68952139 ~ 68952402 (+)
G1404694 NA non-coding downstream 41264 68972600 ~ 68972939 (+)
G1404281 LOC106566460 other upstream 248601 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 587083 68301028 ~ 68345013 (+)
G1404105 NA other upstream 640492 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1153087 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1190876 67738962 ~ 67739702 (+)
G1404700 NA other downstream 178378 69109714 ~ 69113350 (+)
G1404785 NA other downstream 314209 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 374360 69305670 ~ 69312263 (+)
G1404827 NA other downstream 433185 69364521 ~ 69369376 (+)
G1405216 NA other downstream 649393 69580729 ~ 69583626 (+)

Expression


Co-expression Network