G1404685


Basic Information

Item Value
gene id G1404685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68952139 ~ 68952402 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604206
gtGATCAATTGTAATGAACGTATTCTAACATCATGTCAGCATATTGCAGATCTCTGCTGTATAATTATGCAATTACAACATTGTAGATCACGTAtgacctctctgtctgttctgtgtctAAACAGGGACCTCCATGGGAgagaattgtattttatttttatttgccctGTATTTAacaagacaagtcagttaagaacaaattcttatttataatgatttGATTAACTATGCTGTGATTTGTAATTATAGTTCATTGTTCCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604206 True 264 lncRNA 0.33 1 68952139 68952402

Neighbor

gene id symbol gene type direction distance location
LOC118939574 NA coding upstream 17821 68932133 ~ 68934318 (+)
LOC110492629 LOC106566457 coding upstream 36756 68912887 ~ 68915383 (+)
LOC110492628 LOC106566456 coding upstream 42908 68904810 ~ 68909231 (+)
LOC110492623 LOC106566463 coding upstream 520395 68422113 ~ 68431744 (+)
LOC110492622 LOC100380652 coding upstream 546948 68396762 ~ 68405191 (+)
LOC110492631 LOC106566454 coding downstream 5163 68957565 ~ 68961010 (+)
LOC110492632 LOC106566452 coding downstream 9345 68961747 ~ 68970217 (+)
LOC110492634 LOC106566451 coding downstream 21312 68973714 ~ 69006032 (+)
LOC110491169 arfgef2 coding downstream 57099 69009501 ~ 69056918 (+)
LOC110492635 bclx coding downstream 107953 69060355 ~ 69104116 (+)
G1404674 NA non-coding upstream 4774 68947133 ~ 68947365 (+)
G1404663 NA non-coding upstream 13856 68938045 ~ 68938283 (+)
G1404662 NA non-coding upstream 14145 68937689 ~ 68937994 (+)
G1404653 NA non-coding upstream 20803 68930578 ~ 68931336 (+)
G1404644 NA non-coding upstream 26896 68925004 ~ 68925243 (+)
G1404694 NA non-coding downstream 20198 68972600 ~ 68972939 (+)
G1404695 NA non-coding downstream 20932 68973334 ~ 68973593 (+)
G1404736 NA non-coding downstream 118389 69070791 ~ 69077789 (+)
G1404737 NA non-coding downstream 121384 69073786 ~ 69076041 (+)
G1404739 NA non-coding downstream 124116 69076518 ~ 69076984 (+)
G1404281 LOC106566460 other upstream 270162 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 608644 68301028 ~ 68345013 (+)
G1404105 NA other upstream 662053 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1174648 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1212437 67738962 ~ 67739702 (+)
G1404700 NA other downstream 157312 69109714 ~ 69113350 (+)
G1404785 NA other downstream 293143 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 353294 69305670 ~ 69312263 (+)
G1404827 NA other downstream 412119 69364521 ~ 69369376 (+)
G1405216 NA other downstream 628327 69580729 ~ 69583626 (+)

Expression


Co-expression Network