G1404694


Basic Information

Item Value
gene id G1404694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 68972600 ~ 68972939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604219
TGGGCTTCAATGGCTATGTGCACCGACACTGCCTACTTAATTTGTTCAATTAGCAAACAAGTGTCAACACACCTATATTTTAGCTTTAATTAGCTTTAAAAAATGCATGGCAAAATGTCTAGAATAACAtaagattagctataaaactgcacatttttttttatctttgccccatagcaaaatgtgtagaattgcaggaagttaGCGGTTTTCCCAAAACAATAGTTTTCTAAAAATTGTGGGGCCCACCCAAATTTCAGCAGGCCCACCTACCAACGAATTTCAGGCTACGCTACTGGTTGACATTTTGTATGTCAAATTGAACTTGCAAATTGaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604219 True 340 lncRNA 0.36 1 68972600 68972939

Neighbor

gene id symbol gene type direction distance location
LOC110492632 LOC106566452 coding upstream 2383 68961747 ~ 68970217 (+)
LOC110492631 LOC106566454 coding upstream 11590 68957565 ~ 68961010 (+)
LOC118939574 NA coding upstream 38282 68932133 ~ 68934318 (+)
LOC110492629 LOC106566457 coding upstream 57217 68912887 ~ 68915383 (+)
LOC110492628 LOC106566456 coding upstream 63369 68904810 ~ 68909231 (+)
LOC110492634 LOC106566451 coding downstream 775 68973714 ~ 69006032 (+)
LOC110491169 arfgef2 coding downstream 36562 69009501 ~ 69056918 (+)
LOC110492635 bclx coding downstream 87416 69060355 ~ 69104116 (+)
LOC118939575 NA coding downstream 151938 69124877 ~ 69168201 (+)
LOC118939479 NA coding downstream 196784 69169723 ~ 69173281 (+)
G1404685 NA non-coding upstream 20198 68952139 ~ 68952402 (+)
G1404674 NA non-coding upstream 25235 68947133 ~ 68947365 (+)
G1404663 NA non-coding upstream 34317 68938045 ~ 68938283 (+)
G1404662 NA non-coding upstream 34606 68937689 ~ 68937994 (+)
G1404653 NA non-coding upstream 41264 68930578 ~ 68931336 (+)
G1404695 NA non-coding downstream 395 68973334 ~ 68973593 (+)
G1404736 NA non-coding downstream 97852 69070791 ~ 69077789 (+)
G1404737 NA non-coding downstream 100847 69073786 ~ 69076041 (+)
G1404739 NA non-coding downstream 103579 69076518 ~ 69076984 (+)
G1404741 NA non-coding downstream 107984 69080923 ~ 69084989 (+)
G1404281 LOC106566460 other upstream 290623 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 629105 68301028 ~ 68345013 (+)
G1404105 NA other upstream 682514 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1195109 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1232898 67738962 ~ 67739702 (+)
G1404700 NA other downstream 136775 69109714 ~ 69113350 (+)
G1404785 NA other downstream 272606 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 332757 69305670 ~ 69312263 (+)
G1404827 NA other downstream 391582 69364521 ~ 69369376 (+)
G1405216 NA other downstream 607790 69580729 ~ 69583626 (+)

Expression


Co-expression Network