G1404866


Basic Information

Item Value
gene id G1404866
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69005577 ~ 69006178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604441
TCTTTATTACTTTTTCATTAAAATGTGATAAAAATGTACATCATATACTATCAATAAGAAAATACTGACCATTTTCAGCACAAATCTATACCTTGATTTATCTGACAAGCAAAAATCATTGCTcattatctttaaaaaaaaaataattaaaaaacaaacagacaaaccaAATTCCAAAGCCTGGTTAGTGTTCTCTGAAACATACAGGTCTCTCCCAGCCTGGTTAGTGTTCTCTGAAACATACAGGTCTCTCCCAGCCTGGTTAGTGTTCTCTGAAACATACAGGTCTCTCCCAGCCTGGTTAGTGTTCTCTGAAACATACAGGTCTCTCCCAGGAATAGAGGAATTCACAGTACAGGAAAAGTGTCATAATCTAAACCCCTAGAAGCTGTTTGTACAGAAAATAAGCTATTTAACAAAATCACTTTTGAAAAAAAGGGAAAGAACAGATTAGAAAATGAAATTAAACCATGAATTAACACAGTGGATCAGTTATAACACATTACAATGTTTACTGACTTAGCAATGAAAAAGAATATACAGAAACATGATTAGAAAATAAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604441 True 563 lncRNA 0.33 2 69005577 69006178

Neighbor

gene id symbol gene type direction distance location
LOC110492630 LOC106566458 coding downstream 88151 68915576 ~ 68917426 (-)
LOC110491168 LOC106566483 coding downstream 109457 68894981 ~ 68896120 (-)
LOC118939478 LOC106566484 coding downstream 212249 68791189 ~ 68795025 (-)
LOC110492626 LOC106566459 coding downstream 233324 68703920 ~ 68772253 (-)
LOC110492627 LOC106566460 coding downstream 301974 68671413 ~ 68703603 (-)
LOC110492636 LOC106566437 coding upstream 106838 69113016 ~ 69123466 (-)
LOC110492644 LOC106566447 coding upstream 348324 69354502 ~ 69379181 (-)
LOC110491170 LOC106566448 coding upstream 464238 69470416 ~ 69506016 (-)
LOC118939576 NA coding upstream 565675 69571853 ~ 69575843 (-)
LOC110491172 LOC106566442 coding upstream 571496 69577674 ~ 69666017 (-)
G1404691 NA non-coding downstream 46227 68957602 ~ 68959350 (-)
G1404687 NA non-coding downstream 53688 68951658 ~ 68951889 (-)
G1404682 NA non-coding downstream 54536 68950635 ~ 68951041 (-)
G1404678 NA non-coding downstream 56672 68948675 ~ 68948905 (-)
G1404661 NA non-coding downstream 67967 68935592 ~ 68937610 (-)
G1404892 NA non-coding upstream 18781 69024959 ~ 69025702 (-)
G1404897 LOC106566435 non-coding upstream 25015 69031193 ~ 69033156 (-)
G1404898 NA non-coding upstream 28952 69035130 ~ 69036007 (-)
G1404920 NA non-coding upstream 64849 69071027 ~ 69076995 (-)
G1404930 NA non-coding upstream 86463 69092641 ~ 69093770 (-)
G1403498 NA other downstream 1561398 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2510910 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 2579255 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 3250967 65715711 ~ 65754610 (-)
G1404974 LOC106566438 other upstream 197108 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 271649 69277827 ~ 69280359 (-)
G1405172 NA other upstream 511577 69517755 ~ 69518113 (-)
G1405917 NA other upstream 1072479 70078657 ~ 70095541 (-)
LOC110492660 LOC106566428 other upstream 1213699 70216538 ~ 70221552 (-)

Expression


Co-expression Network