G1404736


Basic Information

Item Value
gene id G1404736
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69070791 ~ 69077789 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604284
tgtcctgttttccccctgaaacacgtagggtatgctctgtctctgtcctgttttccccctgaaacacgtagggtatgctctgtcctgttttccccctgaaacacgtagggtatgctctgtcctgttttccccctgaaacatgtagggtatgctctgtctctgtcctgttttccccctgaaacacgtAGGGTATGCTCTTTCACTAAAACACACAGATCTGTTGGCAGCTGTACGATGTatagagtaggtgtgtcctattACCTGGTTTTATTGTGGCGTTAGAAAGAGAACCAACCAGCTGCGTAGGGGAGGCCACACCCTGTTAAGGCACAGGATGACTTACTGCTGTCCTACCTAACAAACATGTTCATTCAGTTCTCCCTGACCGCTCTTCATCCCATAGCTGCTACATAACCTATTCGGTCCTGATTTGTGTTAGAGAAATGACCTGAGAAGAACGactgaaagagaggttgaaagtTAATAGCAGATTGAGTTATGAAGACTGAGTGACAGGTGGAATCCCCCTTGAGTCAACGGTTGGGTCTCTGTCTGACCTCAGTGGTGAAGGAGGTTAAAGGCAATGGCGGGAACAGCACATTTTAAGGAATGCTAGGTGGaatcccccttctctctgaccTCAGTGGTGAAGGAGGTTGGAAAGTAAACAGAGTGCCAAAGAGCGTCATTTCGAAACAAATTGTGTGAGAGAATGTAGTCAGTCTACTGtaacagtatggtggagggagagaatgtagtctactgatacactgtaacagtatagtggagggagagaatgtagtctactgatacagtatggtggagggagagaatgtagtctattgatacagtatggtggagggagagaatgtagtctactgtaacagtatggtttagggagagaatgtagtctactgatacagtATGGTGGAcggagagaatgtagtctactgtaacagtatggtgaagggagagaatgtagttactgatacactgtaacagtatggtggagggagataatgtagtctactgatacactgtaacagtatagtggagggagaggatgtagtctactgatacactgtaacagtatggtagagggagagaatgttgtctactgatacactgtaacagtatggtggagagaatgtagtctactgatacatACTGAtacagtatggtggagggagagaatgtagtctactgtaacagtatggtagagggagagaatgtagtctactgatacactgtaacagtatggtggagggagagaatgtagtctactgatacactgtaacagtatggtagagggagagaatgtagtctactgatacactgtaacagtatggtggagggagagaatgtagtctactgatacactgtaacagtatggtggagggagacaatgtagtctactgatacactgtaacagtatggtggagggagagaatgtagtctactgatactgtaacagtatggtggagggagagaatgtagtctactgatactgtaacagtatggtggagggagagaatgtagtctactgatactgtaacagtatggtggagggagagaatgtagtctactgatacagtatgatggagggagagaatgtagtctactgatacactgtaacagtatggtggagggagagaatgtagtctactgatacactgtaacagtatagtggagggagagaatgtagtctactgatacactgtaacagtatggtggagggagagaatgtagtctactgtaacagtatagtggagggagagaatgtagtctactgatacagtatggtggagggagagaatgtagtctactgatacactgtaacagtatggtggagggagagaatgtagtctactgatacactgtaacagtatagtggagggagagaatgtagtctactgatacagtatagtggagggagagaatgtagtctactgatacactgtaacagtatagtggagggagagaatgtagtctactgatacagtatggtggagggagagaatgtagtctacatTTCATAGGCAGCACATATTTGTTCAGACAGTCGAGCCCTTTCAATGAATACATAAACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATAAACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACACACTGCACATAGGATACAC

Function

NR:

description
GDNF family receptor alpha-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604284 True 2305 lncRNA 0.44 4 69070791 69077789

Neighbor

gene id symbol gene type direction distance location
LOC110491169 arfgef2 coding upstream 13873 69009501 ~ 69056918 (+)
LOC110492634 LOC106566451 coding upstream 64759 68973714 ~ 69006032 (+)
LOC110492632 LOC106566452 coding upstream 100574 68961747 ~ 68970217 (+)
LOC110492631 LOC106566454 coding upstream 109781 68957565 ~ 68961010 (+)
LOC118939574 NA coding upstream 136473 68932133 ~ 68934318 (+)
LOC118939575 NA coding downstream 47088 69124877 ~ 69168201 (+)
LOC118939479 NA coding downstream 91934 69169723 ~ 69173281 (+)
LOC110492638 LOC106566438 coding downstream 104419 69182208 ~ 69207186 (+)
LOC110492915 NA coding downstream 195002 69272791 ~ 69274286 (+)
LOC110492639 LOC106566439 coding downstream 200012 69277801 ~ 69281615 (+)
G1404695 NA non-coding upstream 97198 68973334 ~ 68973593 (+)
G1404694 NA non-coding upstream 97852 68972600 ~ 68972939 (+)
G1404685 NA non-coding upstream 118389 68952139 ~ 68952402 (+)
G1404674 NA non-coding upstream 123426 68947133 ~ 68947365 (+)
G1404663 NA non-coding upstream 132508 68938045 ~ 68938283 (+)
G1404741 NA non-coding downstream 3134 69080923 ~ 69084989 (+)
G1404745 NA non-coding downstream 14861 69092650 ~ 69094088 (+)
G1404700 NA non-coding downstream 31925 69109714 ~ 69113350 (+)
G1404752 NA non-coding downstream 53440 69131229 ~ 69131639 (+)
G1404753 NA non-coding downstream 74748 69152537 ~ 69153073 (+)
G1404281 LOC106566460 other upstream 388814 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 727296 68301028 ~ 68345013 (+)
G1404105 NA other upstream 780705 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1293300 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1331089 67738962 ~ 67739702 (+)
G1404785 NA other downstream 167756 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 227907 69305670 ~ 69312263 (+)
G1404827 NA other downstream 286732 69364521 ~ 69369376 (+)
G1405216 NA other downstream 502940 69580729 ~ 69583626 (+)

Expression


Co-expression Network