G1404741


Basic Information

Item Value
gene id G1404741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69080923 ~ 69084989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604290
tgatgggtagaggagaccatgtgaacagtaacagacattctgatgggtagaggaccatgtgaacagtaacagacattcttatgggtagaggagaccatgtgaacagtaacagacattctgatgggtgcaggaccatgtgaacagtaacagacattctgatgggtagaggagaccatgtgaacagtaacagacattctgatgggtagaggagaccatgtgaacagtaacagacattctgatgggtacaggaccgtgtgaacagtaacagacattctgatgggtagaggaccgtgtgaacagtaacagacattctgatgggtagaggaccgtgtgaacagtaacagacattctgatgggtagaggaccgTGTGAACAggaacagacattctgatgggtagaggaccatgtgaacagtaacagacattctgatgggtagaggaccgtgtgaacagtaacagacattctgatgggtagaggagacaatgtgaacagtaacagacattctgatgggtagaggagaccatgtgaacagtaacagacattctgatgggtagaggagaccatgtgaacagtaacagacattttgatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604290 True 589 lncRNA 0.46 2 69080923 69084989

Neighbor

gene id symbol gene type direction distance location
LOC110491169 arfgef2 coding upstream 24005 69009501 ~ 69056918 (+)
LOC110492634 LOC106566451 coding upstream 74891 68973714 ~ 69006032 (+)
LOC110492632 LOC106566452 coding upstream 110706 68961747 ~ 68970217 (+)
LOC110492631 LOC106566454 coding upstream 119913 68957565 ~ 68961010 (+)
LOC118939574 NA coding upstream 146605 68932133 ~ 68934318 (+)
LOC118939575 NA coding downstream 39888 69124877 ~ 69168201 (+)
LOC118939479 NA coding downstream 84734 69169723 ~ 69173281 (+)
LOC110492638 LOC106566438 coding downstream 97219 69182208 ~ 69207186 (+)
LOC110492915 NA coding downstream 187802 69272791 ~ 69274286 (+)
LOC110492639 LOC106566439 coding downstream 192812 69277801 ~ 69281615 (+)
G1404736 NA non-coding upstream 3134 69070791 ~ 69077789 (+)
G1404739 NA non-coding upstream 3939 69076518 ~ 69076984 (+)
G1404737 NA non-coding upstream 4882 69073786 ~ 69076041 (+)
G1404695 NA non-coding upstream 107330 68973334 ~ 68973593 (+)
G1404694 NA non-coding upstream 107984 68972600 ~ 68972939 (+)
G1404745 NA non-coding downstream 7661 69092650 ~ 69094088 (+)
G1404700 NA non-coding downstream 24725 69109714 ~ 69113350 (+)
G1404752 NA non-coding downstream 46240 69131229 ~ 69131639 (+)
G1404753 NA non-coding downstream 67548 69152537 ~ 69153073 (+)
G1404756 NA non-coding downstream 89623 69174612 ~ 69175232 (+)
G1404281 LOC106566460 other upstream 398946 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 737428 68301028 ~ 68345013 (+)
G1404105 NA other upstream 790837 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1303432 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1341221 67738962 ~ 67739702 (+)
G1404785 NA other downstream 160556 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 220707 69305670 ~ 69312263 (+)
G1404827 NA other downstream 279532 69364521 ~ 69369376 (+)
G1405216 NA other downstream 495740 69580729 ~ 69583626 (+)

Expression


Co-expression Network