G1404700


Basic Information

Item Value
gene id G1404700
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69109714 ~ 69113350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604245
GGttgattttatttttgttgttgtcattgtagcgttaagatttcccttcactggaactaagggaacCATGAGaaccagccccagaccattattcctcttccaccatactttacagttggcactatgcattggtgcaggtagcgttctccttgcatccgccaaacccagatttgtgcgtcggactgccagatggtgaaatgtgattaatcactccagagaacacgtttccactgttACATAGTCCAatagcggcaagctttacaccactccagccgacacctGGCATTGCGCAAGGTGAACTTAGGCTTGAGTGCGGCTGCTCGGGCCATGgaaagctccagacgaacagttctaGTGCCACGTTGAAGGTCAccgctcttcagtaaggccattctactgccagtgttctatggagattgcatggctgtgtgctcgacttTATACACATGTACGTGGCtgaaaggggtgtccacataatgttgtgtatatagtgtacgtgcagatacagttgaagtgggaagtttacatacacttaagtgtGAGTCATaacaactcgtttttcaaccactccacaaatgtcttgttaaaaaaactagagttttggcaagtcggttaggacatctactttgtgcatgacacaagtaatttttcccaacaattgtttacagattacttcacttataattcactgtatcacaattacaatgggtcagaagtttacttacacttagttgactgtgcctttaaacagcttagaaaattccataaaatgcttcagaagcttctgataggctaattgacatcatttgagtcaattggagtgtATACCTGTggatacctgtggatgtatttcaagacctaccttcaaactcagtacctttttgcttgacataatgggaaaatcaaaagaaatcaaccaagacctcagaaaaaaatgtagacctccacgagtctggttcatccttgggagtaatttccaaatgcctgaagttaccacgttcatctgtacaaacaatagtatgcaagtatagaCACcgtgggaccatgcagccgtcataccgctcaggaaggagacacattctgtctcctagagatgaacgtactttggtgcgaaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagttgctggaggcaacatgtacaaaagtatctatatccacagtaaaacgagtcctatatcgacataacatgaaaggccgctcagcaaggaagaagctactgctccaaaaccgccattaaaaagccagactatggtttgcaactgcacatgaggacaaagattgtactttttggagaaatgtcctctggtctgatgaaaccaaaatacaactgtttggccataatgaccaatgacaaagaacaccatcccaaccatgatgcacgggggtgacagcatcatgttgtgggggtgctttgctgcaggagggactggtgcataaCAAAAAatagcatcatgagggaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcaggaagttaaagcttggtcgcaaatgggtcttccaaaaggacatttgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagaacatttgtgggcagaactgaaaaggtgtgtgcgagcaaggaggcctacaaacctgactcatttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaacccaaaacgtttgacccaagataaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaattaatcattctctctactattattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaagacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttccgtcttcaactgtacgTGCACCACgctattgctctctctccctctgctgtggGTGAGTCTCGCAAGCTGTCACAAATGGCGAGAGGCTGAATCTCATTGGCTCGAACTCTAATTTCTTGGGGGGCTTGCCCACATGGGGGGAAATGTAGGGAATACGGTGCAGCACAGCTTCTAGAAAACAGTCTTTCAAACTATGGATTTCATGGCTAATTAAGGTAACACAGTAATGTTGCTCAGATTAtacatgtatgaactacacattgacacattcagtCCAAAGTGTGAGGTCTAAAAAAATACTTATTTGTCACCAAAGtaccagagcatgtctttaaagCCAAAGTATCAGAGCATGTCTTTAAAGCCAAAGTATCAGAGCATGTCTTTAAAGCCAAAGTATCAGAGCATGTCTTTAAAGCCAAAGTTCCGGTGCATTTCTTTAAAGCCAAAGTTCCGGTGCATGTCTTTTAAGACAAAGTatcggagcatgtctttaaagcCAAACTTCCGGTGCATGTCTTTTAAGACAACGTatcggagcatgtctttaaagcCAAAGTTCCGGTGCATGTCTTTTAAGACAAAGTatcggagcatgtctttaaagcCAAAGTATCGGAGCATGTCTTTTAAGACAAAGTATCGGAGCATGTTTTTAAAGCCAAAGTATCGGAGCATGTCTTTTAAGCCAACGTATCGGAGCATGTCTATAAAGAGTTTCACAGTTATGGGATAAAACAGAAGTATACTAGGCTGTGTTTTTTGTTAGAGTTGAGTGTATCTGAACCACAGGGACCACCAAGGCAATTCCAATATTCACTTCCTTTAGGGCCAAACCAGACACAATATTCACTTCCTTTAGGGCCAAACCAGACACAATACCACTGGAATGCTAAAGCAGAAATTAGGACAAGCAGCCCATATTGTTAGACATATTTTctcagatagatggagagagaagaaagccaaccgttttttgtaattttttacttaaacagtatggggatggatTCAGATGGGTAGCTTGCCACTATGGTGGAAGGAGAGGCTGTTGGCTAAACAGAGGCTCAAGGTGTTGTCAAGTCCAACCGCTCCTCATTTCAGTACAGTATCCCGTCCATTCCATTACTTCATTTACTTCCATTGTTTGTTCTTGTAGTCCCACTTGGCAGAAAAGCCCTCAATTGGGTTGACCCGCATGTCCAGCATCCTCTGGATCTGCTTAGCCTGCCACTCCTCACCAAAAGTGTGAGGTTGAGGTGGGTACACTGTGCGACACAAGGGAGAAAGAGAACAGCAGCTTTG
>TU1604246
GGttgattttatttttgttgttgtcattgtagcgttaagatttcccttcactggaactaagggaacCATGAGaaccagccccagaccattattcctcttccaccatactttacagttggcactatgcattggtgcaggtagcgttctccttgcatccgccaaacccagatttgtgcgtcggactgccagatggtgaaatgtgattaatcactccagagaacacgtttccactgttACATAGTCCAatagcggcaagctttacaccactccagccgacacctGGCATTGCGCAAGGTGAACTTAGGCTTGAGTGCGGCTGCTCGGGCCATGgaaagctccagacgaacagttctaGTGCCACGTTGAAGGTCAccgctcttcagtaaggccattctactgccagtgttctatggagattgcatggctgtgtgctcgacttTATACACATGTACGTGGCtgaaaggggtgtccacataatgttgtgtatatagtgtacgtgcagatacagttgaagtgggaagtttacatacacttaagtgtGAGTCATaacaactcgtttttcaaccactccacaaatgtcttgttaaaaaaactagagttttggcaagtcggttaggacatctactttgtgcatgacacaagtaatttttcccaacaattgtttacagattacttcacttataattcactgtatcacaattacaatgggtcagaagtttacttacacttagttgactgtgcctttaaacagcttagaaaattccataaaatgcttcagaagcttctgataggctaattgacatcatttgagtcaattggagtgtATACCTGTggatacctgtggatgtatttcaagacctaccttcaaactcagtacctttttgcttgacataatgggaaaatcaaaagaaatcaaccaagacctcagaaaaaaatgtagacctccacgagtctggttcatccttgggagtaatttccaaatgcctgaagttaccacgttcatctgtacaaacaatagtatgcaagtatagaCACcgtgggaccatgcagccgtcataccgctcaggaaggagacacattctgtctcctagagatgaacgtactttggtgcgaaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagttgctggaggcaacatgtacaaaagtatctatatccacagtaaaacgagtcctatatcgacataacatgaaaggccgctcagcaaggaagaagctactgctccaaaaccgccattaaaaagccagactatggtttgcaactgcacatgaggacaaagattgtactttttggagaaatgtcctctggtctgatgaaaccaaaatacaactgtttggccataatgaccaatgacaaagaacaccatcccaaccatgatgcacgggggtgacagcatcatgttgtgggggtgctttgctgcaggagggactggtgcataaCAAAAAatagcatcatgagggaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcaggaagttaaagcttggtcgcaaatgggtcttccaaaaggacatttgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagaacatttgtgggcagaactgaaaaggtgtgtgcgagcaaggaggcctacaaacctgactcatttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaacccaaaacgtttgacccaagataaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaattaatcattctctctactattattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaagacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttccgtcttcaactgtacgTGCACCACgctattgctctctctccctctgctgtggGTGAGTCTCGCAAGCTGTCACAAATGGCGAGAGGCTGAATCTCATTGGCTCGAACTCTAATTTCTTGGGGGGCTTGCCCACATGGGGGGAAATGTAGGGAATACGGTGCAGCACAGCTTCTAGAAAACAGTCTTTCAAACTATGGATTTCATGGCTAATTAAGGTAACACAGTAATGTTGCTCAGATTAtacatgtatgaactacacattgacacattcagtCCAAAGTGTGAGGTCTAAAAAAATACTTATTTGTCACCAAAGtaccagagcatgtctttaaagCCAAAGTATCAGAGCATGTCTTTAAAGCCAAAGTATCAGAGCATGTCTTTAAAGCCAAAGTATCAGAGCATGTCTTTAAAGCCAAAGTTCCGGTGCATTTCTTTAAAGCCAAAGTTCCGGTgcatgtctttaaagcCAAAGTTCCGGTGCATGTCTTTTAAGACAAAGTatcggagcatgtctttaaagcCAAAGTATCGGAGCATGTCTTTTAAGACAAAGTATCGGAGCATGTTTTTAAAGCCAAAGTATCGGAGCATGTCTTTTAAGCCAACGTATCGGAGCATGTCTATAAAGAGTTTCACAGTTATGGGATAAAACAGAAGTATACTAGGCTGTGTTTTTTGTTAGAGTTGAGTGTATCTGAACCACAGGGACCACCAAGGCAATTCCAATATTCACTTCCTTTAGGGCCAAACCAGACACAATATTCACTTCCTTTAGGGCCAAACCAGACACAATACCACTGGAATGCTAAAGCAGAAATTAGGACAAGCAGCCCATATTGTTAGACATATTTTctcagatagatggagagagaagaaagccaaccgttttttgtaattttttacttaaacagtatggggatggatTCAGATGGGTAGCTTGCCACTATGGTGGAAGGAGAGGCTGTTGGCTAAACAGAGGCTCAAGGTGTTGTCAAGTCCAACCGCTCCTCATTTCAGTACAGTATCCCGTCCATTCCATTACTTCATTTACTTCCATTGTTTGTTCTTGTAGTCCCACTTGGCAGAAAAGCCCTCAATTGGGTTGACCCGCATGTCCAGCATCCTCTGGATCTGCTTAGCCTGCCACTCCTCACCAAAAGTGTGAGGTTGAGGTGGGTACACTGTGCGACACAAGGGAGAAAGAGAACAGCAGCTTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604245 False 3394 TUCP 0.42 2 69109714 69113350
TU1604246 True 3313 lncRNA 0.42 2 69109714 69113350

Neighbor

gene id symbol gene type direction distance location
LOC110492635 bclx coding upstream 5598 69060355 ~ 69104116 (+)
LOC110491169 arfgef2 coding upstream 52796 69009501 ~ 69056918 (+)
LOC110492634 LOC106566451 coding upstream 103682 68973714 ~ 69006032 (+)
LOC110492632 LOC106566452 coding upstream 139497 68961747 ~ 68970217 (+)
LOC110492631 LOC106566454 coding upstream 148704 68957565 ~ 68961010 (+)
LOC118939575 NA coding downstream 11527 69124877 ~ 69168201 (+)
LOC118939479 NA coding downstream 56373 69169723 ~ 69173281 (+)
LOC110492638 LOC106566438 coding downstream 68858 69182208 ~ 69207186 (+)
LOC110492915 NA coding downstream 159441 69272791 ~ 69274286 (+)
LOC110492639 LOC106566439 coding downstream 164451 69277801 ~ 69281615 (+)
G1404745 NA non-coding upstream 15626 69092650 ~ 69094088 (+)
G1404741 NA non-coding upstream 24725 69080923 ~ 69084989 (+)
G1404736 NA non-coding upstream 31925 69070791 ~ 69077789 (+)
G1404739 NA non-coding upstream 32730 69076518 ~ 69076984 (+)
G1404737 NA non-coding upstream 33673 69073786 ~ 69076041 (+)
G1404752 NA non-coding downstream 17879 69131229 ~ 69131639 (+)
G1404753 NA non-coding downstream 39187 69152537 ~ 69153073 (+)
G1404756 NA non-coding downstream 61262 69174612 ~ 69175232 (+)
G1404793 NA non-coding downstream 158289 69271639 ~ 69271885 (+)
G1404281 LOC106566460 other upstream 427737 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 766219 68301028 ~ 68345013 (+)
G1404105 NA other upstream 819628 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1332223 67773293 ~ 67777491 (+)
G1403463 NA other upstream 1370012 67738962 ~ 67739702 (+)
G1404785 NA other downstream 132195 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 192346 69305670 ~ 69312263 (+)
G1404827 NA other downstream 251171 69364521 ~ 69369376 (+)
G1405216 NA other downstream 467379 69580729 ~ 69583626 (+)
G1405218 NA other downstream 472639 69585989 ~ 69586906 (+)

Expression


Co-expression Network