G1404944



Basic Information


Item Value
gene id G1404944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69127460 ~ 69127726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1604537
aagtaaaagtGTCAATCAATTCAAATTACttgtattaagcaaaccagacggcacaatttccTTGTGTTtcaatttacagatagccagtggCACACCAacactaattgacaaacaaagcatttgtgtttagtgagtctgctagattagaggcagaagggatgaccagggatgttctcttgataaatgcgTGAATTGTAATAACCAATCAGTCTGTCAT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1604537 True 217 lncRNA 0.37 2 69127460 69127726

Neighbor


gene id symbol gene type direction distance location
LOC110492636 LOC106566437 coding downstream 3994 69113016 ~ 69123466 (-)
LOC110492630 LOC106566458 coding downstream 210034 68915576 ~ 68917426 (-)
LOC110491168 LOC106566483 coding downstream 231340 68894981 ~ 68896120 (-)
LOC118939478 LOC106566484 coding downstream 334132 68791189 ~ 68795025 (-)
LOC110492626 LOC106566459 coding downstream 355207 68703920 ~ 68772253 (-)
LOC110492644 LOC106566447 coding upstream 226776 69354502 ~ 69379181 (-)
LOC110491170 LOC106566448 coding upstream 342690 69470416 ~ 69506016 (-)
LOC118939576 NA coding upstream 444127 69571853 ~ 69575843 (-)
LOC110491172 LOC106566442 coding upstream 449948 69577674 ~ 69666017 (-)
LOC118936543 LOC106566425 coding upstream 999527 70127253 ~ 70133280 (-)
G1404937 NA non-coding downstream 19031 69108055 ~ 69108429 (-)
G1404930 NA non-coding downstream 33690 69092641 ~ 69093770 (-)
G1404920 NA non-coding downstream 50465 69071027 ~ 69076995 (-)
G1404898 NA non-coding downstream 91453 69035130 ~ 69036007 (-)
G1404897 LOC106566435 non-coding downstream 94304 69031193 ~ 69033156 (-)
G1404952 NA non-coding upstream 46971 69174697 ~ 69244266 (-)
G1404962 NA non-coding upstream 58017 69185743 ~ 69186013 (-)
G1404981 NA non-coding upstream 90107 69217833 ~ 69219097 (-)
G1405006 NA non-coding upstream 135388 69263114 ~ 69264104 (-)
G1405010 NA non-coding upstream 144541 69272267 ~ 69272475 (-)
G1403498 NA other downstream 1683281 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2632793 66484901 ~ 66494667 (-)
G1402686 srpk3 other downstream 2701138 66425551 ~ 66426322 (-)
LOC110492562 LOC106568106 other downstream 3372850 65715711 ~ 65754610 (-)
G1404974 LOC106566438 other upstream 75560 69203286 ~ 69207158 (-)
G1405016 nsfl1c other upstream 150101 69277827 ~ 69280359 (-)
G1405172 NA other upstream 390029 69517755 ~ 69518113 (-)
G1405917 NA other upstream 950931 70078657 ~ 70095541 (-)
LOC110492660 LOC106566428 other upstream 1092151 70216538 ~ 70221552 (-)

Expression



Co-expression Network