G1404753


Basic Information

Item Value
gene id G1404753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69152537 ~ 69153073 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604305
atgaggaaccaacgtgccatagaggggagggggatgtgtcccgataacgatgaaccaacgtgccatagaggagagggggatgtgtcctgataacgatgaaccaacgtgccatagaggagagggggatgtgtcctgataacgatgaaccaacgtgccatagaggagaggaggatgtgtccccgataacgatgaaccaacgtgccatagaggggagggggatgtgtcctgataacgatgaaccaacgtgccatagaggagagggggatgtgtccccgataacgatgaaccaacgtgccatagaggagaggaggatgtgtccccgataacgatgaaccaacgtgccatagaggagaggaggatgtgtccccgataacgatgaaccaacgtgccatagaggagaggaggatgtgtctccgataacgatgaaccaacgtgccatagaggagagggggatgtgtccccgacaacgatgaaccaacgtgccatagaggagagggggatgtgtccccgataacgatgaaccaacgtgccatagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604305 True 537 lncRNA 0.54 1 69152537 69153073

Neighbor

gene id symbol gene type direction distance location
LOC110492635 bclx coding upstream 48421 69060355 ~ 69104116 (+)
LOC110491169 arfgef2 coding upstream 95619 69009501 ~ 69056918 (+)
LOC110492634 LOC106566451 coding upstream 146505 68973714 ~ 69006032 (+)
LOC110492632 LOC106566452 coding upstream 182320 68961747 ~ 68970217 (+)
LOC110492631 LOC106566454 coding upstream 191527 68957565 ~ 68961010 (+)
LOC118939479 NA coding downstream 16650 69169723 ~ 69173281 (+)
LOC110492638 LOC106566438 coding downstream 29135 69182208 ~ 69207186 (+)
LOC110492915 NA coding downstream 119718 69272791 ~ 69274286 (+)
LOC110492639 LOC106566439 coding downstream 124728 69277801 ~ 69281615 (+)
LOC110492640 mfsd2 coding downstream 135940 69289013 ~ 69305392 (+)
G1404752 NA non-coding upstream 20898 69131229 ~ 69131639 (+)
G1404700 NA non-coding upstream 39187 69109714 ~ 69113350 (+)
G1404745 NA non-coding upstream 58449 69092650 ~ 69094088 (+)
G1404741 NA non-coding upstream 67548 69080923 ~ 69084989 (+)
G1404739 NA non-coding upstream 75553 69076518 ~ 69076984 (+)
G1404756 NA non-coding downstream 21539 69174612 ~ 69175232 (+)
G1404793 NA non-coding downstream 118566 69271639 ~ 69271885 (+)
G1404799 NA non-coding downstream 132211 69285284 ~ 69285698 (+)
G1404810 NA non-coding downstream 159940 69313013 ~ 69313227 (+)
G1404281 LOC106566460 other upstream 470560 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 809042 68301028 ~ 68345013 (+)
G1404105 NA other upstream 862451 68289515 ~ 68290086 (+)
G1403655 LOC106566486 other upstream 1375046 67773293 ~ 67777491 (+)
G1404785 NA other downstream 92472 69245545 ~ 69253709 (+)
fkbp1ab LOC100705189 other downstream 152623 69305670 ~ 69312263 (+)
G1404827 NA other downstream 211448 69364521 ~ 69369376 (+)
G1405216 NA other downstream 427656 69580729 ~ 69583626 (+)
G1405218 NA other downstream 432916 69585989 ~ 69586906 (+)

Expression


Co-expression Network