Gene
RNA
| Item | Value |
|---|---|
| gene id | G1405006 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 69263114 ~ 69264104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| perforin-1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1604614 | True | 797 | lncRNA | 0.44 | 3 | 69263114 | 69264104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492636 | LOC106566437 | coding | downstream | 139648 | 69113016 ~ 69123466 (-) |
| LOC110492630 | LOC106566458 | coding | downstream | 345688 | 68915576 ~ 68917426 (-) |
| LOC110491168 | LOC106566483 | coding | downstream | 366994 | 68894981 ~ 68896120 (-) |
| LOC118939478 | LOC106566484 | coding | downstream | 469786 | 68791189 ~ 68795025 (-) |
| LOC110492626 | LOC106566459 | coding | downstream | 490861 | 68703920 ~ 68772253 (-) |
| LOC110492644 | LOC106566447 | coding | upstream | 90398 | 69354502 ~ 69379181 (-) |
| LOC110491170 | LOC106566448 | coding | upstream | 206312 | 69470416 ~ 69506016 (-) |
| LOC118939576 | NA | coding | upstream | 307749 | 69571853 ~ 69575843 (-) |
| LOC110491172 | LOC106566442 | coding | upstream | 313570 | 69577674 ~ 69666017 (-) |
| LOC118936543 | LOC106566425 | coding | upstream | 863149 | 70127253 ~ 70133280 (-) |
| G1404952 | NA | non-coding | downstream | 18848 | 69174697 ~ 69244266 (-) |
| G1404981 | NA | non-coding | downstream | 44017 | 69217833 ~ 69219097 (-) |
| G1404962 | NA | non-coding | downstream | 77101 | 69185743 ~ 69186013 (-) |
| G1404944 | NA | non-coding | downstream | 135388 | 69127460 ~ 69127726 (-) |
| G1404937 | NA | non-coding | downstream | 154685 | 69108055 ~ 69108429 (-) |
| G1405010 | NA | non-coding | upstream | 8163 | 69272267 ~ 69272475 (-) |
| G1405017 | NA | non-coding | upstream | 20871 | 69284975 ~ 69285607 (-) |
| G1404991 | LOC105013763 | non-coding | upstream | 41623 | 69305727 ~ 69312263 (-) |
| G1404993 | NA | non-coding | upstream | 87613 | 69351717 ~ 69353915 (-) |
| G1405067 | NA | non-coding | upstream | 151872 | 69415976 ~ 69416177 (-) |
| G1404974 | LOC106566438 | other | downstream | 55956 | 69203286 ~ 69207158 (-) |
| G1403498 | NA | other | downstream | 1818935 | 67443421 ~ 67444179 (-) |
| G1402707 | LOC106566505 | other | downstream | 2768447 | 66484901 ~ 66494667 (-) |
| G1402686 | srpk3 | other | downstream | 2836792 | 66425551 ~ 66426322 (-) |
| G1405016 | nsfl1c | other | upstream | 13723 | 69277827 ~ 69280359 (-) |
| G1405172 | NA | other | upstream | 253651 | 69517755 ~ 69518113 (-) |
| G1405917 | NA | other | upstream | 814553 | 70078657 ~ 70095541 (-) |
| LOC110492660 | LOC106566428 | other | upstream | 955773 | 70216538 ~ 70221552 (-) |
| G1406228 | NA | other | upstream | 1471543 | 70735647 ~ 70742179 (-) |
