G1404793


Basic Information

Item Value
gene id G1404793
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69271639 ~ 69271885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604349
ctgtatacttctggcccttctttggacactgtgttaactaacctgcagacgtgcttcaatgccatacaactctccttccgtggccaccaactgctcttaaatgcaagtaaaactaaatgcatgctcttcaaccgatcgctgcccgcatctGTCCactactagcatcactactctggatggttctgacttagaatatgtggacaactacaaatacctaggtgtctggttagactgttaactctccttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604349 True 247 lncRNA 0.45 1 69271639 69271885

Neighbor

gene id symbol gene type direction distance location
LOC110492638 LOC106566438 coding upstream 64453 69182208 ~ 69207186 (+)
LOC118939479 NA coding upstream 98358 69169723 ~ 69173281 (+)
LOC118939575 NA coding upstream 103438 69124877 ~ 69168201 (+)
LOC110492635 bclx coding upstream 167523 69060355 ~ 69104116 (+)
LOC110491169 arfgef2 coding upstream 214721 69009501 ~ 69056918 (+)
LOC110492915 NA coding downstream 906 69272791 ~ 69274286 (+)
LOC110492639 LOC106566439 coding downstream 5916 69277801 ~ 69281615 (+)
LOC110492640 mfsd2 coding downstream 17128 69289013 ~ 69305392 (+)
fkbp1ab LOC100705189 coding downstream 33785 69305670 ~ 69312263 (+)
LOC110492642 LOC106566441 coding downstream 41438 69313323 ~ 69347555 (+)
G1404756 NA non-coding upstream 96407 69174612 ~ 69175232 (+)
G1404753 NA non-coding upstream 118566 69152537 ~ 69153073 (+)
G1404752 NA non-coding upstream 140000 69131229 ~ 69131639 (+)
G1404700 NA non-coding upstream 158289 69109714 ~ 69113350 (+)
G1404745 NA non-coding upstream 177551 69092650 ~ 69094088 (+)
G1404799 NA non-coding downstream 13399 69285284 ~ 69285698 (+)
G1404810 NA non-coding downstream 41128 69313013 ~ 69313227 (+)
G1404807 NA non-coding downstream 79683 69351568 ~ 69354055 (+)
G1404832 NA non-coding downstream 106387 69378272 ~ 69378569 (+)
G1404785 NA other upstream 17930 69245545 ~ 69253709 (+)
G1404281 LOC106566460 other upstream 589662 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 928144 68301028 ~ 68345013 (+)
G1404105 NA other upstream 981553 68289515 ~ 68290086 (+)
G1404827 NA other downstream 92636 69364521 ~ 69369376 (+)
G1405216 NA other downstream 308844 69580729 ~ 69583626 (+)
G1405218 NA other downstream 314104 69585989 ~ 69586906 (+)
G1405310 LOC106566443 other downstream 399579 69671464 ~ 69672674 (+)

Expression


Co-expression Network