G1404807


Basic Information

Item Value
gene id G1404807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69351568 ~ 69354055 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604364
GTCCGTATCAACGGTGGACTAATGAAAACAAATAACAAAATATACATTTATGAGGCGATTTTTTTCCCCTTTAAAACACCAGTGAATTGCACAAGAAATGTAGAAAATAATCGCGTTCCCGCCTGACTACATTGCAGATGtatgccagatcttacaatgtCTGGATaggtctataggtctataacataatatcagctaaccacatcatatgatgTAGCAATCTGATAGGTCTATACGTCTATAACAtaatatcagctaaccacatcatatgatgTAGCAATCTGATGCCAAGACTGCACAGTGTGATGACGTGGCACGCAACGCCTGCGCATCTAGATGGGCAGGAACTCGCGATCGATCAATAACTCCCAGCCTGAGTGAGGTTGGCCCTGCACGTCACGTTCTGTCGGGGAGACCGAGTCAGTCTATAAAACGCATATCGTTATGATTATCACTCACACTATACTTTCATGATTGGGATTCTGCTAGAGATATTCTCAAACACTTATGGCTTTTAATGAAACATTTAGAGGCCTTACCAAGCAGGCCTCACAaatgacgggggggggggggggggcattcataggtaatgatgatgatgatacatgAAGGGGGAGAAATTATAGCAGCACAGAATATCGAGTCATATTCCAAATCCCAACAGGGCTGTGGAAGTTGTTCATACCTGCTGTGAAAGCACACGACGACAGTGAAACGTGTGTAAAGAGGCCTTCAAGCAGTTCATCCATTCATCAGCCAATCTATTTTTGTCATTGCTGCTTGTGATTTTACTACTCATAAGTGCCGGAAGTCATAGCGAAGAGGTTAAATAAGCAAAACCACGCAGAGGAGGGATTGTCAAGCAGAAGAAAATGAACAGGAATTACAGAGCAACAACATAAACGCACATCCAGCACACCTTACAGAAAGCAGTAAAACACTATTGTGTACAAGAAAGAAAGTCATGGAAGGCAAATGTTTTTCAGCATTCAGAGGTAAATGGCCTGTAATGGTCAGGATCTTCAGCTATGCTACAATCTAAATTCAAATTCACTGTTTCTTGGTTACAGTTGATTATTTCACTTTAGCTTTGGAAACGTATCCCATAATACAGGTATTGAATAGTTATGGAATATCAAAATGATattgcacaacaacaacaacaacaacaacaacaaaaaactctgATGAAAAACTGCAGACATAAggtgtggcgcagtggtctaaggctagagattctgggttcgcgaCCCGGGAGACCCACGGGGCGGCTTACAATTGGTCTGGGTTTaggtgagggtttggccggcagggatgtccttgtcccatcgcgcactagcgactcttgTGGTGGGTCGGGTGCAGCGCACGCTGACACGTTGGGTTAagtccgggttaagtgggcattgtgtcaagaagcagtgcggctcggctgggttgtgtttccgaggacacacggctctcaaccttcgcctcttcTGAGTcggtacgggagttgcagcgatgagacaagactgtaactgccAATTTGGATACCATGGAAACCGTAGACGTATTAGACTTTGGAAACACAAACTTGACTTCAAGCAAAATGGGGGAAAGGGAATTGCTTAACTTCATAAAGTGAATAATAGTGCAGAACAAAATGGATGACTAAAGAAACGACCAgatctgtttcctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAGATCTGTTCCTGTTTCCTCTCTGAACTACTCAATATACTTCACAAGATCTGTTCCTGTTTCCTCTCTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAGATCTGTTGCCTGTTTCCTCTCTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCACAAgatctgtttcctgtttcctctcTGAACTACTCAATATACTTCAACTCAATGGACTGTTCTTGCTGGTTGCATCACAATCTTATAGGACATCAGTTAGCTCATTAGTCCCTAACAAAGACTAATACTAAAACATTACAGTATAGCGTCTGCTTGCTCAGCCTTTCAATTATTTGACATCTCAACGACTTTACATTCATTACAGCCCAAAATAACAAGACACTAAAATCCTGCCAACTCAATCATAATTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604364 True 2428 lncRNA 0.42 2 69351568 69354055

Neighbor

gene id symbol gene type direction distance location
LOC110492642 LOC106566441 coding upstream 4013 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 39364 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 46176 69289013 ~ 69305392 (+)
LOC110492639 LOC106566439 coding upstream 69953 69277801 ~ 69281615 (+)
LOC110492915 NA coding upstream 77291 69272791 ~ 69274286 (+)
LOC118939480 NA coding downstream 74005 69428060 ~ 69428841 (+)
LOC110492656 LOC106566444 coding downstream 338967 69693022 ~ 69696403 (+)
LOC110492659 LOC106566420 coding downstream 632122 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 689193 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 724638 70078693 ~ 70095267 (+)
G1404810 NA non-coding upstream 38341 69313013 ~ 69313227 (+)
G1404799 NA non-coding upstream 65870 69285284 ~ 69285698 (+)
G1404793 NA non-coding upstream 79683 69271639 ~ 69271885 (+)
G1404756 NA non-coding upstream 176336 69174612 ~ 69175232 (+)
G1404832 NA non-coding downstream 24217 69378272 ~ 69378569 (+)
G1404839 NA non-coding downstream 37403 69391458 ~ 69412846 (+)
G1405082 NA non-coding downstream 76270 69430325 ~ 69431433 (+)
G1405118 NA non-coding downstream 114994 69469049 ~ 69470157 (+)
G1405169 NA non-coding downstream 162033 69516088 ~ 69516360 (+)
G1404785 NA other upstream 97859 69245545 ~ 69253709 (+)
G1404700 NA other upstream 238218 69109714 ~ 69113350 (+)
G1404281 LOC106566460 other upstream 669591 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 1008073 68301028 ~ 68345013 (+)
G1404827 NA other downstream 10466 69364521 ~ 69369376 (+)
G1405216 NA other downstream 226674 69580729 ~ 69583626 (+)
G1405218 NA other downstream 231934 69585989 ~ 69586906 (+)
G1405310 LOC106566443 other downstream 317409 69671464 ~ 69672674 (+)
G1405605 LOC106566425 other downstream 775866 70129921 ~ 70132301 (+)

Expression


Co-expression Network