G1404993


Basic Information

Item Value
gene id G1404993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69351717 ~ 69353915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604599
GGGACTAATGAGCTAACTGATGTCCTATAAGATTGTGATGCAACCAGCAAGAACAGTCCATTGAGTTGAAGTATATTGAGTAGTTCAgagaggaaacaggaaacagatcTTGTGAAGTATATTGAGTAGTTCAgagaggaaacaggaaacagatcTTGTGAAGTATATTGAGTAGTTCAgagaggaaacaggaaacagatcTTGTGAAGTATATTGAGTAGTTCAgagaggaaacaggaaacagatcTTGTGAAGTATATTGAGTAGTTCAgagaggaaacaggaaacagatcTTGTGAAGTATATTGAGTAGTTCAGAGAGGAAACAGGCAcagatcTTGTGAAGTATATTGAGTAGTTCAGAGAGGAAACAGGAACAGATCTTGTGAAGTATATTGAGTAGTTCAGAGAGGAAACAGGAAacaggaaacaggaaacagatcTGGTCGTTTCTTTAGTCATCCATTTTGTTCTGCACTATTATTCACTTTATGAAGTTAAGCAATTCCCTTTCCCCCATTTTGCTTGAAGTCAAGTTTGTGTTTCCAAAGTCTAATACGTCTACGGTTTCCATGGTATCCAAATTggcagttacagtcttgtctcatcgctgcaactcccgtaccgACTCAgaagaggcgaaggttgagagccgtgtgtcctcggaaacacaacccagccgagccgcactgcttcttgacacaatgcccacttaacccggactTAACCCAACGTGTCAGCGTGCGCTGCACCCGACCCACCAcaagagtcgctagtgcgcgatgggacaaggacatccctgccggccaaaccctcacctAAACCCAGACCAATTGTAAGCCGCCCCGTGGGTCTCCCGGGtcgcgaacccagaatctctagccttagaccactgcgccacaccTTATGTCTGCAGTTTTTCATcagagttttttgttgttgttgttgttgttgttgttgtgcaatATCATTTTGATATTCCATAACTATTCAATACCTGTATTATGGGATACGTTTCCAAAGCTAAAGTGAAATAATCAACTGTAACCAAGAAACAGTGAATTTGAATTTAGATTGTAGCATAGCTGAAGATCCTGACCATTACAGGCCATTTACCTCTGAATGCTGAAAAACATTTGCCTTCCATGACTTTCTTTCTTGTACACAATAGTGTTTTACTGCTTTCTGTAAGGTGTGCTGGATGTGCGTTTATGTTGTTGCTCTGTAATTCCTGTTCATTTTCTTCTGCTTGACAATCCCTCCTCTGCGTGGTTTTGCTTATTTAACCTCTTCGCTATGACTTCCGGCACTTATGAGTAGTAAAATCACAAGCAGCAATGACAAAAATAGATTGGCTGATGAATGGATGAACTGCTTGAAGGCCTCTTTACACACGTTTCACTGTCGTCGTGTGCTTTCACAGCAGGTATGAACAACTTCCACAGCCCTGTTGGGATTTGGAATATGACTCGATATTCTGTGCTGCTATAATTTCTCCCCCTTcatgtatcatcatcatcattacctatgaatgcccccccccccccccccgtcattTGTGAGGCCTGCTTGGTAAGGCCTCTAAATGTTTCATTAAAAGCCATAAGTGTTTGAGAATATCTCTAGCAGAATCCCAATCATGAAAGTATAGTGTGAGTGATAATCATAACGATATGCGTTTTATAGACTGACTCGGTCTCCCCGACAGAACGTGACGTGCAGGGCCAACCTCACTCAGGCTGGGAGTTATTGATCGATCGCGAGTTCCTGCCCATCTAGATGCGCAGGCGTTGCGTGCCACGTCATCACACTGTGCAGTCTTGGCATCAGATTGCTAcatcatatgatgtggttagctgatattaTGTTATAGACGTATAGACCTATCAGATTGCTAcatcatatgatgtggttagctgatattatgttatagacctatagacctATCCAGacattgtaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604599 True 1962 lncRNA 0.43 4 69351717 69353915

Neighbor

gene id symbol gene type direction distance location
LOC110492636 LOC106566437 coding downstream 228251 69113016 ~ 69123466 (-)
LOC110492630 LOC106566458 coding downstream 434291 68915576 ~ 68917426 (-)
LOC110491168 LOC106566483 coding downstream 455597 68894981 ~ 68896120 (-)
LOC118939478 LOC106566484 coding downstream 558389 68791189 ~ 68795025 (-)
LOC110492626 LOC106566459 coding downstream 579464 68703920 ~ 68772253 (-)
LOC110492644 LOC106566447 coding upstream 587 69354502 ~ 69379181 (-)
LOC110491170 LOC106566448 coding upstream 116501 69470416 ~ 69506016 (-)
LOC118939576 NA coding upstream 217938 69571853 ~ 69575843 (-)
LOC110491172 LOC106566442 coding upstream 223759 69577674 ~ 69666017 (-)
LOC118936543 LOC106566425 coding upstream 773338 70127253 ~ 70133280 (-)
G1404991 LOC105013763 non-coding downstream 39454 69305727 ~ 69312263 (-)
G1405017 NA non-coding downstream 66110 69284975 ~ 69285607 (-)
G1405010 NA non-coding downstream 79242 69272267 ~ 69272475 (-)
G1405006 NA non-coding downstream 87613 69263114 ~ 69264104 (-)
G1404981 NA non-coding downstream 132620 69217833 ~ 69219097 (-)
G1405067 NA non-coding upstream 62061 69415976 ~ 69416177 (-)
G1405076 NA non-coding upstream 69323 69423238 ~ 69423487 (-)
G1405104 NA non-coding upstream 95347 69449262 ~ 69449564 (-)
G1405107 NA non-coding upstream 101271 69455186 ~ 69455456 (-)
G1405138 NA non-coding upstream 114442 69468357 ~ 69468876 (-)
G1405016 nsfl1c other downstream 71358 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 144559 69203286 ~ 69207158 (-)
G1403498 NA other downstream 1907538 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2857050 66484901 ~ 66494667 (-)
G1405172 NA other upstream 163840 69517755 ~ 69518113 (-)
G1405917 NA other upstream 724742 70078657 ~ 70095541 (-)
LOC110492660 LOC106566428 other upstream 865962 70216538 ~ 70221552 (-)
G1406228 NA other upstream 1381732 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1906407 71260322 ~ 71260817 (-)

Expression


Co-expression Network