G1404827


Basic Information

Item Value
gene id G1404827
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69364521 ~ 69369376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604386
tcatttgtacatactgtacccgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagctagattacttgttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgatttgaggtaactgccaaaataaaggaaaccccaacatagtgtcttaatgGGGGCGTTGGGTCACCaccagccagaacagcttcaatgcacctcggcatagattctacaagtgtctggaactctattggagagaTGAGACACCATTTCTTCCAGGAGAAATtcccatcatttggtgttttgttgatggtggtggaaaacactgtctcggTCGCCGTTCCAGAATCTTCcagaagtgttcaattgggtttagatctggtgactgagacggccacgGCATTACATAGttttcatcaaaccattcagtgaccactcgtgccctgtggatgggggcattgccaaaataatggcctgcccagcatttgtAAGCATGATGAGATGCTTATGGCTTTATTAACCTGCttggaagcacctgctttaaaTATACTTTGtttccctcatttactcaagtgtttcctttattttggcagttacacgTCGTTTTCCATGCTATTAGTGAGGGGAAGGGGCACTGTGATGGTCAACTCCTGTACCGTATTCATCTGTTACTGTTGACCAATTGGTCGATTTACTAATGACAGCCAATTAAACAAAGCAATCAAAGGCTGTCTGTTATCTAGGAGGACAGGGGTTTTGCCCAATCACTGGCTTCCAGACTGGGTGGGAGGAGATAAGCAAAACAGATATGACAGATATAGCAGCCTGAGGATTGTAGGAAGGGTCAGGATAGGGTATGACAGGTTGTGACGAAGGCCAACAGCATACAAACAGAAAACACGGTCAAGCTGAGGAGAGCAGTGGAAGCAAGCCTGGAAAGAAAGGTAGAACATGTCAAATATATAGACAAAATAAGGGGTTTGGCACAACTGGAGTCCACCATTACATGTCCAGCTATGTTTATagcattttgtgacatctgctgatatgAAAATggctttagaaatacatttgattgattacatCTCTTCTCCTTTGAGATGGACCCTGGTTGGTAAGTGGTGTGAGGAAGGCTGGTGTTATTATGTGTAGGAAGGCTGGGTGCTATAAGAGAAGGCTGGTGTTATTATGTGTAGGAAGGCTTGGTGGtataagagaaggctgggtggtataagagaaggctgggtggtataagagaaggctgggtgctataagagaaggctgggcggtataagagaaggccgggtggtataagagaaggctgggtggtataagagaaggctgggtggtataAGAGAAGGCTGGATGGTATAAGAGAAGGCTGGTGTTATTATGTGTAGGAAGGCTGGGTGTTATAAGAGAAGGCTGGATGCTATAAGAAAAGGCTGGGTGGtataagagaaggctgggtgctataagagaaggctgggtgctataagagaaggctgggtgctataagagaaggctgggtgctataagagaaggctgggtggtataAGAGAAGGCTGGATGGTAGaagagaaggctgggtggtataagagaaggctgggtggtataagagaaggctgggtggtataAGAGAAGGCTGGTGTTATTATGTGTAGGAAGGCTGGGTTCTATAAGGGAAGGCTGGGTGGtataagagaaggctgggtggtataagagaaggctgggtggtattatgtgtaggAAGGCTGGGTGCTATAAGAGAAGGCCGGGTGGtataagagaaggctgggtggtattatgtgtaggAAGGCTGGGTGCTATAAGAGAAGGCCGGGTGCtataagagaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaggAAGGCTGGGTGCtataagagaaggctgggtggtataagagaaggctgggtggtataagagaaggctgggtggtaCTATGTGTAATAAGGTTGGGTTCtataagagaaggctgggtggtaCTATGTGTAATAAGGTTGGGTTCTATAAGAGAAGGCTGGTGTTATTATGTGTAATAAGGCTGGGTTCTATAAGGgaaggctgggtggtattatgtgtaggAAGGCTGGGTGCTATAAGAGAAGGCCGGGTGCTATAAGAGAAGGCTGGTGTTATTATGTGTAGGAAGGCTGGGTGCtataagagaaggctgggtggtaCTATGTGTAGGAAGGCTGGGTGGtataagagaaggctgggtggtataagagaaggctgggtggtataagagaaggctgggtgctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaggAAGGCTGGGTGCTATAAGAGAAGGCCGGGTGCTATAAGAGTAGGCCGGGTGGtataagagaaggctgggtggtattatgtgtaatatggctgggttctataagagaaggctgggtggtattatgtgtaggaaggctgggttctataagagaaggctgggtggtattatgtgtaggaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaataaggctgggttctataagggaaggctgggtggtattatgtgtaataaggctgggttctataagagaaggctgggtggtattatgtgtaataaggctgggtt

Function

NR:

description
keratin-associated protein 4-4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604386 True 3328 TUCP 0.45 4 69364521 69369376

Neighbor

gene id symbol gene type direction distance location
LOC110492642 LOC106566441 coding upstream 16966 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 52317 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 59129 69289013 ~ 69305392 (+)
LOC110492639 LOC106566439 coding upstream 82906 69277801 ~ 69281615 (+)
LOC110492915 NA coding upstream 90244 69272791 ~ 69274286 (+)
LOC118939480 NA coding downstream 58684 69428060 ~ 69428841 (+)
LOC110492656 LOC106566444 coding downstream 323646 69693022 ~ 69696403 (+)
LOC110492659 LOC106566420 coding downstream 616801 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 673872 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 709317 70078693 ~ 70095267 (+)
G1404807 NA non-coding upstream 10466 69351568 ~ 69354055 (+)
G1404810 NA non-coding upstream 51294 69313013 ~ 69313227 (+)
G1404799 NA non-coding upstream 78823 69285284 ~ 69285698 (+)
G1404793 NA non-coding upstream 92636 69271639 ~ 69271885 (+)
G1404832 NA non-coding downstream 8896 69378272 ~ 69378569 (+)
G1404839 NA non-coding downstream 22082 69391458 ~ 69412846 (+)
G1405082 NA non-coding downstream 60949 69430325 ~ 69431433 (+)
G1405118 NA non-coding downstream 99673 69469049 ~ 69470157 (+)
G1405169 NA non-coding downstream 146712 69516088 ~ 69516360 (+)
G1404785 NA other upstream 110812 69245545 ~ 69253709 (+)
G1404700 NA other upstream 251171 69109714 ~ 69113350 (+)
G1404281 LOC106566460 other upstream 682544 68681446 ~ 68681977 (+)
LOC110492620 NA other upstream 1021026 68301028 ~ 68345013 (+)
G1405216 NA other downstream 211353 69580729 ~ 69583626 (+)
G1405218 NA other downstream 216613 69585989 ~ 69586906 (+)
G1405310 LOC106566443 other downstream 302088 69671464 ~ 69672674 (+)
G1405605 LOC106566425 other downstream 760545 70129921 ~ 70132301 (+)
G1405676 NA other downstream 887446 70256822 ~ 70257430 (+)

Expression


Co-expression Network