G1405169


Basic Information

Item Value
gene id G1405169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69516088 ~ 69516360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604818
ctgataTAGCTGAATCCTCTCATTTAAAGaggaaccatcatcatcatcatcaccactggtAACGACAGACaagaaccatcatcatcatcaccactggtAACGACAGACAAGCACCatgaaccatcatcatcatcaccactggtAACGACAGACAAGCACCatgaaccatcatcatcatcatcaccactggtAACGACAGACAAGCACCatgaaccatcatcatcatcaccactggtAACGACAGACAAGCACCatgaaccatcatcatcatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604818 True 273 lncRNA 0.44 1 69516088 69516360

Neighbor

gene id symbol gene type direction distance location
LOC118939480 NA coding upstream 87247 69428060 ~ 69428841 (+)
LOC110492642 LOC106566441 coding upstream 168533 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 203884 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 210696 69289013 ~ 69305392 (+)
LOC110492639 LOC106566439 coding upstream 234473 69277801 ~ 69281615 (+)
LOC110492656 LOC106566444 coding downstream 176662 69693022 ~ 69696403 (+)
LOC110492659 LOC106566420 coding downstream 469817 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 526888 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 562333 70078693 ~ 70095267 (+)
LOC110492652 LOC106566422 coding downstream 580089 70096449 ~ 70111837 (+)
G1405118 NA non-coding upstream 45931 69469049 ~ 69470157 (+)
G1405082 NA non-coding upstream 84655 69430325 ~ 69431433 (+)
G1404839 NA non-coding upstream 103242 69391458 ~ 69412846 (+)
G1404832 NA non-coding upstream 137519 69378272 ~ 69378569 (+)
G1404807 NA non-coding upstream 162033 69351568 ~ 69354055 (+)
G1405170 NA non-coding downstream 197 69516557 ~ 69517010 (+)
G1405171 NA non-coding downstream 1237 69517597 ~ 69517962 (+)
G1405188 NA non-coding downstream 14765 69531125 ~ 69531336 (+)
G1405198 NA non-coding downstream 22449 69538809 ~ 69539311 (+)
G1405203 NA non-coding downstream 25814 69542174 ~ 69542388 (+)
G1404827 NA other upstream 146712 69364521 ~ 69369376 (+)
G1404785 NA other upstream 262379 69245545 ~ 69253709 (+)
G1404700 NA other upstream 402738 69109714 ~ 69113350 (+)
G1404281 LOC106566460 other upstream 834111 68681446 ~ 68681977 (+)
G1405216 NA other downstream 64369 69580729 ~ 69583626 (+)
G1405218 NA other downstream 69629 69585989 ~ 69586906 (+)
G1405310 LOC106566443 other downstream 155104 69671464 ~ 69672674 (+)
G1405605 LOC106566425 other downstream 613561 70129921 ~ 70132301 (+)
G1405676 NA other downstream 740462 70256822 ~ 70257430 (+)

Expression


Co-expression Network