G1405203


Basic Information

Item Value
gene id G1405203
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69542174 ~ 69542388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604853
GTGAGAGATAACAAGGACATGGCTCCTTTTGTATCACATTCAGGGTGGTTCAGTGTCGGACTGGGAATGAAATTAGGCTCTGGCCACACAGGCCCACAACAGCTGTACCACACAGGCCCAGTGCGGCTGTACCACACAGGCCCAATACAGCTGTCCCACACAGGCCCAGTGCGGCTGTACCACACAGGTCCAATCCTACTTTCAATCTCTCCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604853 True 215 lncRNA 0.54 1 69542174 69542388

Neighbor

gene id symbol gene type direction distance location
LOC118939480 NA coding upstream 113333 69428060 ~ 69428841 (+)
LOC110492642 LOC106566441 coding upstream 194619 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 229970 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 236782 69289013 ~ 69305392 (+)
LOC110492639 LOC106566439 coding upstream 260559 69277801 ~ 69281615 (+)
LOC110492656 LOC106566444 coding downstream 150634 69693022 ~ 69696403 (+)
LOC110492659 LOC106566420 coding downstream 443789 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 500860 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 536305 70078693 ~ 70095267 (+)
LOC110492652 LOC106566422 coding downstream 554061 70096449 ~ 70111837 (+)
G1405198 NA non-coding upstream 2863 69538809 ~ 69539311 (+)
G1405188 NA non-coding upstream 10838 69531125 ~ 69531336 (+)
G1405171 NA non-coding upstream 24212 69517597 ~ 69517962 (+)
G1405170 NA non-coding upstream 25164 69516557 ~ 69517010 (+)
G1405169 NA non-coding upstream 25814 69516088 ~ 69516360 (+)
G1405214 NA non-coding downstream 30014 69572402 ~ 69573103 (+)
G1405233 LOC106572122 non-coding downstream 83540 69625928 ~ 69641957 (+)
G1405240 NA non-coding downstream 96122 69638510 ~ 69639633 (+)
G1405245 NA non-coding downstream 107359 69649747 ~ 69652316 (+)
G1405325 NA non-coding downstream 156469 69698857 ~ 69699511 (+)
G1404827 NA other upstream 172798 69364521 ~ 69369376 (+)
G1404785 NA other upstream 288465 69245545 ~ 69253709 (+)
G1404700 NA other upstream 428824 69109714 ~ 69113350 (+)
G1404281 LOC106566460 other upstream 860197 68681446 ~ 68681977 (+)
G1405216 NA other downstream 38341 69580729 ~ 69583626 (+)
G1405218 NA other downstream 43601 69585989 ~ 69586906 (+)
G1405310 LOC106566443 other downstream 129076 69671464 ~ 69672674 (+)
G1405605 LOC106566425 other downstream 587533 70129921 ~ 70132301 (+)
G1405676 NA other downstream 714434 70256822 ~ 70257430 (+)

Expression


Co-expression Network