G1405252


Basic Information

Item Value
gene id G1405252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69546405 ~ 69588880 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604910
gttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggctagttgacaacacctttatttaaccaggtaggctagttgacaacacctttatttaaccaggttaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgacaacacctttatttaaccaggtaggctagttgacaacacctttatttaaccaggtaggctagttgacaacacctttatttaaccaggttaggctagttgagaacacctttatttaaccaggtaggctagttgacaacacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactgcgacctggccaagataaagcatagcagtgtgaacagacaacacagagttccacatggagtaaacaatgaacaagtcaataacacagtagaaaaaatagtctatatacattgtgtgcaaaaggcatgaggcggtaggcgaataattacaatttagcagattaacactgccgaagtcgaggatcggtaggatagtcagttttactagggtaagtttggcggcgtgagtgaaggaggctttgttgcggattAGAAAGCCGACTCtggatttgattttagattggagatgtttgatatgagtctggaaggagagtttacaatctagccagacacctagatacttatagatgtccacatattctaggtcggaaccatccagggtggtgatgctaatcgggcgtgcgggtgcaggcagcgaacggttgaaaagcatgcatttggtttttactagcgtttaagagcagttggaggccacggaaggagtgttgtatggcattgaagctcgtttggaggttagttaacacagtgtccaaagaggggccagaagtatacagaatggtgttgtctgcgtagaggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604910 True 1033 lncRNA 0.42 2 69546405 69588880

Neighbor

gene id symbol gene type direction distance location
LOC110491170 LOC106566448 coding downstream 40389 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 167224 69354502 ~ 69379181 (-)
LOC110492636 LOC106566437 coding downstream 422939 69113016 ~ 69123466 (-)
LOC110492630 LOC106566458 coding downstream 628979 68915576 ~ 68917426 (-)
LOC110491168 LOC106566483 coding downstream 650285 68894981 ~ 68896120 (-)
LOC118936543 LOC106566425 coding upstream 538373 70127253 ~ 70133280 (-)
LOC118939578 NA coding upstream 596495 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 627658 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 640959 70229839 ~ 70282239 (-)
tmed4 LOC106566412 coding upstream 833549 70422429 ~ 70426035 (-)
G1405184 NA non-coding downstream 19472 69526709 ~ 69526933 (-)
G1405138 NA non-coding downstream 77529 69468357 ~ 69468876 (-)
G1405107 NA non-coding downstream 90949 69455186 ~ 69455456 (-)
G1405104 NA non-coding downstream 96841 69449262 ~ 69449564 (-)
G1405076 NA non-coding downstream 122918 69423238 ~ 69423487 (-)
G1405281 NA non-coding upstream 23556 69612436 ~ 69619436 (-)
G1405292 NA non-coding upstream 55139 69644019 ~ 69644846 (-)
G1405297 NA non-coding upstream 67842 69656722 ~ 69657089 (-)
G1405401 LOC106566443 non-coding upstream 83123 69672003 ~ 69673550 (-)
G1405402 NA non-coding upstream 84796 69673676 ~ 69674418 (-)
G1405172 NA other downstream 28292 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 266046 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 339247 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 751380 68791189 ~ 68795025 (-)
G1403498 NA other downstream 2102226 67443421 ~ 67444179 (-)
G1405917 NA other upstream 489777 70078657 ~ 70095541 (-)
G1406228 NA other upstream 1146767 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1671442 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1913599 71501118 ~ 71547366 (-)

Expression


Co-expression Network