G1405310 (LOC106566443)


Basic Information

Item Value
gene id G1405310
gene name LOC106566443
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69671464 ~ 69672674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604973
GTAAGGATAAGGTGTGAGAGATTGCGTCTACAGCGTACGTAGAGGAACTAACCTGttctgtgtgtctccctctcttcactgaTCCAGTCAGCCTCTCCTGTGGTCACTCATTTTGTCGACAATGTTTTACAAACTTTCGGAGAACACAGAATCTGTGTCCTCATTGCCGGGCTAGAATCTCAACAGCTGAGGGAAATCTCTCAACCAATCACATTCTGAAGAGCTTGGCCGACAAAGCTAAAGAGGAACCAGTACGCGACGAGAAGACAAGGGGGACAGAGTGGTTGTGTCCAGACCATGACGAGAAACTGAAACTATTCTGTGAGACAGACCAACAGTTGGTTTGCGTCATATGCCGGGACGGAGAGAAGCATGACGGGCATAAGTTTAAACCTATCAAAGAGGCAGCCTCAGCTAGGAGGAGGGAACTAGATGAGGCCCTTCAGTTCCTCACTAGTGACAACAGCTCCGTGGAGCACCTGGCCAAACAACAGGAAAAAGAGATGACAAAAACCAAGACTAAGTCCTGTCAGCTGAGGACTCAAATCAGCAGCCAGTTTGAAGAGATGCACCAGTTTCTGAAGAAGAGGGAAGATCAGATAAAGAATGAGTTgcaggagaaagaagagaagacCTTGACGAAGATGAGAGGGAATTTAGAGAGTATGGAGTTGATACTGTCAGAGAGGAAAGTGAAGGAGGTGATGATGAAATCTGCTCAGAACATCCCGGACAGTGAGGGTTTCCTGCAGTGGTGGAATGAACAGGGCCTGTCTGAGGTGGAGGCACTAAAGAACAGGGACATGCCACCACCAGAACTTCATGGGGAGGACACGACTGAGACGCAAGGAGCCACCAAGGAGCGTCCATACAAGTCCAGGGTGGATGACCTAAAGGTGacacctgtctccgtctctctggggccctatgagtctgacctaaag

Function

NR:

description
nuclear factor 7, brain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604973 True 944 TUCP 0.49 2 69671464 69672674

Neighbor

gene id symbol gene type direction distance location
LOC118939480 NA coding upstream 242623 69428060 ~ 69428841 (+)
LOC110492642 LOC106566441 coding upstream 323909 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 359260 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 366072 69289013 ~ 69305392 (+)
LOC110492639 LOC106566439 coding upstream 389849 69277801 ~ 69281615 (+)
LOC110492656 LOC106566444 coding downstream 20348 69693022 ~ 69696403 (+)
LOC110492659 LOC106566420 coding downstream 313503 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 370574 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 406019 70078693 ~ 70095267 (+)
LOC110492652 LOC106566422 coding downstream 423775 70096449 ~ 70111837 (+)
G1405245 NA non-coding upstream 19148 69649747 ~ 69652316 (+)
G1405233 LOC106572122 non-coding upstream 29507 69625928 ~ 69641957 (+)
G1405240 NA non-coding upstream 31831 69638510 ~ 69639633 (+)
G1405214 NA non-coding upstream 98361 69572402 ~ 69573103 (+)
G1405203 NA non-coding upstream 129076 69542174 ~ 69542388 (+)
G1405325 NA non-coding downstream 26183 69698857 ~ 69699511 (+)
G1405331 NA non-coding downstream 31508 69704182 ~ 69704394 (+)
G1405344 NA non-coding downstream 66222 69738896 ~ 69768630 (+)
G1405349 NA non-coding downstream 75053 69747727 ~ 69748528 (+)
G1405352 NA non-coding downstream 85193 69757867 ~ 69759009 (+)
G1405218 NA other upstream 84558 69585989 ~ 69586906 (+)
G1405216 NA other upstream 87838 69580729 ~ 69583626 (+)
G1404827 NA other upstream 302088 69364521 ~ 69369376 (+)
G1404785 NA other upstream 417755 69245545 ~ 69253709 (+)
G1405605 LOC106566425 other downstream 457247 70129921 ~ 70132301 (+)
G1405676 NA other downstream 584148 70256822 ~ 70257430 (+)
G1406381 NA other downstream 1296941 70969615 ~ 70972604 (+)
G1406424 NA other downstream 1529768 71202442 ~ 71206092 (+)
G1406505 NA other downstream 1537598 71210272 ~ 71210764 (+)

Expression


Co-expression Network